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SCN18_25_8_15_R2_B_scaffold_1415

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1415_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(263..1273)
DNA (1011bp) protein (337aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REQ5_PELHB
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
SCN18_25_8_15_R2_B_scaffold_1415_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1363..2181
DNA (819bp) protein (273aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Cobalamin synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RER0_PELHB
cobalamin-5-phosphate synthase CobS
SCN18_25_8_15_R2_B_scaffold_1415_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2223..2855)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F9B80
Glutathione S-transferase {ECO:0000313|EMBL:KFI31829.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
glutathione S-transferase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1415_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2966..3868
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036E7D68
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EYD76166.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1415_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3875..4609
DNA (735bp) protein (245aa)
Transpoter n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REQ9_PELHB
CblY, a non-orthologous displasment for Alpha-rib azole-5'-phosphate phosphatase {ECO:0000313|EMBL:CDP50075.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
transporter
SCN18_25_8_15_R2_B_scaffold_1415_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4649..5680)
DNA (1032bp) protein (344aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
tRNA-dihydrouridine synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REQ4_PELHB
tRNA dihydrouridine synthase A
SCN18_25_8_15_R2_B_scaffold_1415_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5746..7455)
DNA (1710bp) protein (570aa)
D-lactate dehydrogenase {ECO:0000256|PIRNR:PIRNR000101}; EC=1.1.1.28 {ECO:0000256|PIRNR:PIRNR000101};; TaxID=759362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain WSH-001).;"
D-lactate dehydrogenase n=2 Tax=Ketogulonicigenium vulgare RepID=E3F2U2_KETVY
D-lactate dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1415_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7640..8104
DNA (465bp) protein (155aa)
transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB0A5
Uncharacterized protein {ECO:0000313|EMBL:KKC34674.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
MarR family transcriptional regulator protein
SCN18_25_8_15_R2_B_scaffold_1415_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8107..9261
DNA (1155bp) protein (385aa)
membrane protein n=1 Tax=Rhizobium loti RepID=UPI00037BECB6
Membrane protein {ECO:0000313|EMBL:KKC35510.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
efflux pump protein FarA
SCN18_25_8_15_R2_B_scaffold_1415_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9263..10813
DNA (1551bp) protein (517aa)
Multidrug resistance protein B n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P5C0_AZOS1
DSBA oxidoreductase {ECO:0000313|EMBL:KKC35667.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
emrB; multidrug resistance protein B
SCN18_25_8_15_R2_B_scaffold_1415_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10876..11397
DNA (522bp) protein (174aa)
Transcriptional regulator, TetR family n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0ASD7_MARMM
Uncharacterized protein {ECO:0000313|EMBL:KFL25854.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
TetR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1415_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11378..11728
DNA (351bp) protein (117aa)
Putative transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXL0_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:EIM28702.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
HxlR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1415_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11899..13185
DNA (1287bp) protein (429aa)
NADH dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003616A40
NADH dehydrogenase {ECO:0000313|EMBL:KKC39791.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
NADH dehydrogenase, FAD-containing subunit
SCN18_25_8_15_R2_B_scaffold_1415_14
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13242..13451)
DNA (210bp) protein (70aa)
Cold-shock DNA-binding domain protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D8D2_9RHIZ
Cold shock protein {ECO:0000313|EMBL:EDQ33274.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
cold-shock DNA-binding domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1415_15
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13650..15038)
DNA (1389bp) protein (463aa)
UPI0003CF7E40 related cluster n=1 Tax=unknown RepID=UPI0003CF7E40
Uncharacterized protein {ECO:0000313|EMBL:ESX98485.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1415_16
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15222..16568
DNA (1347bp) protein (449aa)
manganese transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C8ACF
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
mntH; manganese transport protein mntH
SCN18_25_8_15_R2_B_scaffold_1415_17
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16611..16796
DNA (186bp) protein (62aa)
Post-segregation antitoxin CcdA
SCN18_25_8_15_R2_B_scaffold_1415_18
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16796..17092
DNA (297bp) protein (99aa)
CcdB-like toxin protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4YZH8_SPHJU
putative plasmid maintenance protein, CcdB
Putative plasmid maintenance protein, CcdB {ECO:0000313|EMBL:AHK46421.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCN18_25_8_15_R2_B_scaffold_1415_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17089..18009)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCM2_PELHB
Membrane protein {ECO:0000313|EMBL:CDP50088.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1415_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18009..18920)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCM2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFC71179.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1415_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19080..19853)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JUY1_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM36126.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCN18_25_8_15_R2_B_scaffold_1415_22
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19931..20302)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000360AD3D
Uncharacterized protein {ECO:0000313|EMBL:KFL31204.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1415_23
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20305..21198)
DNA (894bp) protein (298aa)
Beta-lactamase n=1 Tax=Nitratireductor indicus C115 RepID=K2NTA1_9RHIZ
Beta-lactamase {ECO:0000313|EMBL:EKF42535.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
beta-lactamase
SCN18_25_8_15_R2_B_scaffold_1415_24
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21198..21419)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB86186.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SCN18_25_8_15_R2_B_scaffold_1415_25
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21492..21797
DNA (306bp) protein (102aa)
ArsR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00036028E2
Uncharacterized protein {ECO:0000313|EMBL:KFL29735.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ArsR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1415_26
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21934..22341
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Xanthobacteraceae bacterium 501b RepID=UPI00037FCC8A
Uncharacterized protein {ECO:0000313|EMBL:EKS38463.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1415_27
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22325..22678
DNA (354bp) protein (118aa)
Transcriptional regulator, TetR family n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8GV74_DEIGI
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AFD26749.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
Displaying 27 items

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