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SCN18_25_8_15_R2_B_scaffold_2356

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2356_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..269)
DNA (267bp) protein (89aa)
Cyclic di-GMP phosphodiesterase response regulator RpfG {ECO:0000313|EMBL:KFC71378.1}; EC=3.1.4.52 {ECO:0000313|EMBL:KFC71378.1};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
SCN18_25_8_15_R2_B_scaffold_2356_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(489..1097)
DNA (609bp) protein (203aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
superoxide dismutase n=1 Tax=Kaistia granuli RepID=UPI00037CE433
Superoxide dismutase
SCN18_25_8_15_R2_B_scaffold_2356_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1335..3428)
DNA (2094bp) protein (698aa)
Protease II n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCI4_PELHB
Peptidase S9 {ECO:0000313|EMBL:KFL25483.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
oligopeptidase B
SCN18_25_8_15_R2_B_scaffold_2356_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3599..4000)
DNA (402bp) protein (134aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Methionine-R-sulfoxide reductase n=1 Tax=uncultured bacterium 270 RepID=E3T6T6_9BACT
methionine-R-sulfoxide reductase
SCN18_25_8_15_R2_B_scaffold_2356_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4174..6531
DNA (2358bp) protein (786aa)
Na(+) H(+) antiporter subunit A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCI6_PELHB
Na(+) H(+) antiporter subunit A {ECO:0000313|EMBL:KFC71381.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
Na(+) H(+) antiporter subunit A
SCN18_25_8_15_R2_B_scaffold_2356_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6528..6950
DNA (423bp) protein (141aa)
Na(+) H(+) antiporter subunit B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCI7_PELHB
Na(+) H(+) antiporter subunit B
Na(+) H(+) antiporter subunit B {ECO:0000313|EMBL:AEQ50659.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCN18_25_8_15_R2_B_scaffold_2356_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6950..7327
DNA (378bp) protein (126aa)
Na(+) H(+) antiporter subunit C n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCI8_PELHB
Monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:KKB76440.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
Na(+) H(+) antiporter subunit C
SCN18_25_8_15_R2_B_scaffold_2356_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7327..8904
DNA (1578bp) protein (526aa)
Na(+) H(+) antiporter subunit D n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCI9_PELHB
Na(+) H(+) antiporter subunit D {ECO:0000313|EMBL:KFC71384.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
Na(+) H(+) antiporter subunit D
SCN18_25_8_15_R2_B_scaffold_2356_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8901..9380
DNA (480bp) protein (160aa)
Na+/H+ antiporter n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IV49_POLGS
Cation:proton antiporter {ECO:0000313|EMBL:KKB82712.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Na+/H+ antiporter
SCN18_25_8_15_R2_B_scaffold_2356_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9377..9682
DNA (306bp) protein (102aa)
Putative monovalent cation/H+ antiporter subunit F n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FWW9_RHIML
Na(+) H(+) antiporter subunit F {ECO:0000313|EMBL:CDP51705.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
phaF2; PhaF2 protein
SCN18_25_8_15_R2_B_scaffold_2356_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9679..10008
DNA (330bp) protein (110aa)
Na(+) H(+) antiporter subunit G n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCJ2_PELHB
Cation:proton antiporter {ECO:0000313|EMBL:KFL25492.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
Na(+) H(+) antiporter subunit G
SCN18_25_8_15_R2_B_scaffold_2356_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10160..10582
DNA (423bp) protein (141aa)
Transcriptional regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCJ3_PELHB
MucR family transcriptional regulator {ECO:0000313|EMBL:KFL25493.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2356_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10720..11133
DNA (414bp) protein (138aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBQ3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKC33737.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
DnaA domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2356_14
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11120..11884
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCJ5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP51589.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2356_15
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12028..12816
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3R4G4_RALPI
AraC family transcriptional regulator {ECO:0000313|EMBL:CDX22170.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2356_16
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12888..13310)
DNA (423bp) protein (141aa)
Sulfur acceptor protein SufE for iron-sulfur cluster assembly n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCJ6_PELHB
Cysteine desufuration protein SufE {ECO:0000313|EMBL:KFL25144.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
sulfur acceptor protein SufE for iron-sulfur cluster assembly
SCN18_25_8_15_R2_B_scaffold_2356_17
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14037..14690)
DNA (654bp) protein (218aa)
Outer membrane protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D4A7_9RHIZ
Opacity protein {ECO:0000313|EMBL:AKI01127.1}; Flags: Precursor;; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
omp; outer membrane protein
SCN18_25_8_15_R2_B_scaffold_2356_18
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14936..15091)
DNA (156bp) protein (52aa)
SCN18_25_8_15_R2_B_scaffold_2356_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15687..17423
DNA (1737bp) protein (579aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCJ7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB82742.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
multi-sensor signal transduction histidine kinase
SCN18_25_8_15_R2_B_scaffold_2356_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17420..18736
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCJ8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB11627.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2356_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18742..19071
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCJ9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB11626.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2356_22
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19115..20257)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCK0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL25137.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2356_23
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20411..20605
DNA (195bp) protein (65aa)
Displaying 23 items

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