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SCN18_25_8_15_R2_B_scaffold_2374

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2374_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..550)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036272E0
Marine sediment metagenome DNA, contig: S06H3_L01401 {ECO:0000313|EMBL:GAI04029.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative ABC transporter ATP-binding protein
SCN18_25_8_15_R2_B_scaffold_2374_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(550..1413)
DNA (864bp) protein (288aa)
Maltose ABC transporter, permease n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2Q8_THERP
maltose ABC transporter permease
Maltose ABC transporter, permease {ECO:0000313|EMBL:ACM05736.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SCN18_25_8_15_R2_B_scaffold_2374_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1410..2414)
DNA (1005bp) protein (335aa)
peptide ABC transporter permease n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627ACC
ABC transporter permease
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAM01230.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SCN18_25_8_15_R2_B_scaffold_2374_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2646..4418)
DNA (1773bp) protein (591aa)
Putative ABC transporter substrate binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7J1_CALAS
putative ABC transporter substrate binding protein
Putative ABC transporter substrate binding protein {ECO:0000313|EMBL:BAM01229.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SCN18_25_8_15_R2_B_scaffold_2374_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4634..5818)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037BCE58
rhamnonate dehydratase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCN18_25_8_15_R2_B_scaffold_2374_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5872..6759)
DNA (888bp) protein (296aa)
amidohydrolase n=1 Tax=Burkholderia sp. JPY251 RepID=UPI00037C3530
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AII87867.1}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Planktomarina temperata RCA23.;"
SCN18_25_8_15_R2_B_scaffold_2374_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6771..7076)
DNA (306bp) protein (102aa)
L-rhamnose 1-epimerase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RTW9_SPHGB
Uncharacterized protein {ECO:0000313|EMBL:KKB81513.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
L-rhamnose 1-epimerase
SCN18_25_8_15_R2_B_scaffold_2374_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7089..7880)
DNA (792bp) protein (264aa)
Transcriptional regulator, IclR family n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7A9_CHLAD
Uncharacterized protein {ECO:0000313|EMBL:KKB81512.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
IclR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2374_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8347..9342
DNA (996bp) protein (332aa)
arabinan endo-1,5-alpha-L-arabinosidase (EC:3.2.1.99)
Arabinan endo-1,5-alpha-L-arabinosidase {ECO:0000256|PIRNR:PIRNR026534}; EC=3.2.1.99 {ECO:0000256|PIRNR:PIRNR026534};; TaxID=709986 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946; / LB-34).;"
Arabinan endo-1,5-alpha-L-arabinosidase n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U475_DEIML
SCN18_25_8_15_R2_B_scaffold_2374_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9474..10487
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CGM4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL32671.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_2374_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10539..11549)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003640254
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CDP50039.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
bacterial regulatory s, lacI family protein
SCN18_25_8_15_R2_B_scaffold_2374_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11728..13281
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036BA7D0
Uncharacterized protein {ECO:0000313|EMBL:KFL28222.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative glycosyl hydrolase
Displaying 12 items

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