ggKbase home page

SCN18_25_8_15_R2_B_scaffold_6087

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_6087_1
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(42..410)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Microbacterium sp. TS-1 RepID=U2YWL6_9MICO
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
rplN; 50S ribosomal protein L14
SCN18_25_8_15_R2_B_scaffold_6087_2
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(414..743)
DNA (330bp) protein (110aa)
30S ribosomal protein S17 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF25_MICTS
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_6087_3
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(743..1057)
DNA (315bp) protein (105aa)
50S ribosomal protein L29 n=1 Tax=Microbacterium yannicii RepID=UPI000316841A
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
rpmC; ribosomal protein L29
SCN18_25_8_15_R2_B_scaffold_6087_4
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(1057..1476)
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XPI0_9MICO
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
rplP; 50S ribosomal protein L16
SCN18_25_8_15_R2_B_scaffold_6087_5
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1476..2234)
DNA (759bp) protein (253aa)
30S ribosomal protein S3 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF28_MICTS
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
rpsC; 30S ribosomal protein S3
SCN18_25_8_15_R2_B_scaffold_6087_6
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(2234..2629)
DNA (396bp) protein (132aa)
50S ribosomal protein L22 n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003758AE0
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
rplV; 50S ribosomal protein L22
SCN18_25_8_15_R2_B_scaffold_6087_7
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(2656..2937)
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=1 Tax=Microbacterium sp. TS-1 RepID=U2YWL1_9MICO
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
rpsS; ribosomal protein S19
SCN18_25_8_15_R2_B_scaffold_6087_8
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(2950..3789)
DNA (840bp) protein (280aa)
50S ribosomal protein L2 n=1 Tax=Microbacterium yannicii RepID=UPI0002E00BE2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rplB; ribosomal protein L2
SCN18_25_8_15_R2_B_scaffold_6087_9
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(3815..4135)
DNA (321bp) protein (107aa)
50S ribosomal protein L23 n=1 Tax=Microbacterium barkeri RepID=UPI000305CBCB
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
rplW; ribosomal protein L23
SCN18_25_8_15_R2_B_scaffold_6087_10
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(4132..4791)
DNA (660bp) protein (220aa)
50S ribosomal protein L4 n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B78E2A
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
rplD; ribosomal protein L4
SCN18_25_8_15_R2_B_scaffold_6087_11
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(4794..4892)
DNA (99bp) protein (33aa)
50S ribosomal protein L3 n=1 Tax=Microbacterium sp. B19 RepID=UPI000345FA97
50S ribosomal protein L3 {ECO:0000313|EMBL:EZP28986.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
rplC; 50S ribosomal protein L3
Displaying 11 items

View Taxonomy