ggKbase home page

SCN18_25_8_15_R2_B_scaffold_3275

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3275_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

3..119
DNA (117bp) protein (39aa)
SCN18_25_8_15_R2_B_scaffold_3275_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(98..2239)
DNA (2142bp) protein (714aa)
(p)ppGpp synthetase n=1 Tax=Microbacterium yannicii RepID=UPI000316A467
Guanosine polyphosphate pyrophosphohydrolase/synthetase {ECO:0000313|EMBL:BAJ76473.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
relA; guanosine polyphosphate pyrophosphohydrolase/synthetase
SCN18_25_8_15_R2_B_scaffold_3275_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2409..3398)
DNA (990bp) protein (330aa)
preprotein translocase subunit SecF n=1 Tax=Microbacterium yannicii RepID=UPI0003732455
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
preprotein translocase subunit SecF
SCN18_25_8_15_R2_B_scaffold_3275_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3398..5128)
DNA (1731bp) protein (577aa)
preprotein translocase subunit SecD n=1 Tax=Microbacterium yannicii RepID=UPI0002E4D27D
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
preprotein translocase subunit SecD
SCN18_25_8_15_R2_B_scaffold_3275_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5167..5616)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031CA844
preprotein translocase subunit YajC
Preprotein translocase subunit YajC {ECO:0000313|EMBL:BAJ76470.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_3275_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5691..6719)
DNA (1029bp) protein (343aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Holliday junction DNA helicase RuvB n=1 Tax=Microbacterium yannicii RepID=UPI0002FF48BE
ruvB; holliday junction resolvasome, helicase subunit
SCN18_25_8_15_R2_B_scaffold_3275_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6712..7338)
DNA (627bp) protein (209aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036FAD9E
holliday junction resolvasome, DNA-binding subunit
SCN18_25_8_15_R2_B_scaffold_3275_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7383..7934)
DNA (552bp) protein (184aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F7DA0
holliday junction resolvasome, endonuclease subunit
SCN18_25_8_15_R2_B_scaffold_3275_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8005..8763)
DNA (759bp) protein (253aa)
Probable transcriptional regulatory protein OR221_1347 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3B7_9MICO
Probable transcriptional regulatory protein OR221_1347 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3275_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8787..9380)
DNA (594bp) protein (198aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000373E226
glutamine amidotransferase
SCN18_25_8_15_R2_B_scaffold_3275_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9377..9538)
DNA (162bp) protein (54aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
pyridoxal biosynthesis lyase n=1 Tax=Microbacterium RepID=UPI0003795656
pyridoxal biosynthesis lyase
Displaying 11 items

View Taxonomy