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SCN18_25_8_15_R2_B_scaffold_3902

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3902_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(2..385)
DNA (384bp) protein (128aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDI8_MICTS
mnmA; tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
SCN18_25_8_15_R2_B_scaffold_3902_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(543..1550)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000371F864
cysteine sulfinate desulfinase/cysteine desulfurase
Cysteine sulfinate desulfinase/cysteine desulfurase {ECO:0000313|EMBL:BAJ76253.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_3902_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1610..3697
DNA (2088bp) protein (696aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
glycosyl hydrolase n=1 Tax=Microbacterium yannicii RepID=UPI00030BE599
type II secretory pathway, pullulanase PulA
SCN18_25_8_15_R2_B_scaffold_3902_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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3748..5082
DNA (1335bp) protein (445aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI000309D5ED
glycosidase
SCN18_25_8_15_R2_B_scaffold_3902_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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5239..5832
DNA (594bp) protein (198aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI000309D5ED
glycosidase
SCN18_25_8_15_R2_B_scaffold_3902_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

5829..7988
DNA (2160bp) protein (720aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
glycogen branching protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003721D82
1,4-alpha-glucan branching enzyme
SCN18_25_8_15_R2_B_scaffold_3902_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(8061..8441)
DNA (381bp) protein (127aa)
thioredoxin n=1 Tax=Microbacterium sp. B19 RepID=UPI00034934FD
Thioredoxin {ECO:0000313|EMBL:KHK97520.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
thioredoxin domain-containing protein
SCN18_25_8_15_R2_B_scaffold_3902_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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8533..9105
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AE06_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE57263.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
SCN18_25_8_15_R2_B_scaffold_3902_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9066..10961)
DNA (1896bp) protein (632aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D44DEE
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAJ76248.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_3902_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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11109..12173
DNA (1065bp) protein (355aa)
permease n=1 Tax=Microbacterium yannicii RepID=UPI0002F8054F
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95472.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
permease
SCN18_25_8_15_R2_B_scaffold_3902_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(12175..12894)
DNA (720bp) protein (240aa)
alpha/beta hydrolase n=1 Tax=Microbacterium yannicii RepID=UPI000311F26D
hydrolase of the alpha/beta superfamily
Predicted hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:BAJ76246.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_3902_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(13193..13573)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFY4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM74389.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
Displaying 12 items

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