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SCN18_25_8_15_R2_B_scaffold_1822

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1822_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(1..933)
DNA (933bp) protein (311aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
alanine dehydrogenase (EC:1.4.1.1)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037D8747
SCN18_25_8_15_R2_B_scaffold_1822_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(990..1979)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DABD93
L-asparaginase II {ECO:0000313|EMBL:GAD35469.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
ansA; L-asparaginase II
SCN18_25_8_15_R2_B_scaffold_1822_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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2031..2507
DNA (477bp) protein (159aa)
peroxiredoxin n=1 Tax=Microbacterium yannicii RepID=UPI0003768F94
Redox protein, regulator of disulfide bondformation {ECO:0000313|EMBL:GAD35468.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
redox protein, regulator of disulfide bond formation
SCN18_25_8_15_R2_B_scaffold_1822_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(2514..3302)
DNA (789bp) protein (263aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000368141A
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:BAJ73358.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_1822_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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3419..4369
DNA (951bp) protein (317aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
putative peptidylprolyl isomerase (EC:5.2.1.8)
hypothetical protein n=1 Tax=Microbacterium RepID=UPI000376DDB6
SCN18_25_8_15_R2_B_scaffold_1822_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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4431..5513
DNA (1083bp) protein (361aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000373BA84
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
SCN18_25_8_15_R2_B_scaffold_1822_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5535..7187)
DNA (1653bp) protein (551aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
UDP-N-acetylmuramyl peptide synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003779135
UDP-N-acetylmuramyl tripeptide synthase
SCN18_25_8_15_R2_B_scaffold_1822_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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7305..8642
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002EC8914
Zinc metalloprotease {ECO:0000313|EMBL:KHK98649.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
membrane-associated Zn-dependent protease 1
SCN18_25_8_15_R2_B_scaffold_1822_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8659..10635)
DNA (1977bp) protein (659aa)
anthranilate synthase n=1 Tax=Microbacterium yannicii RepID=UPI0002E2342B
Anthranilate/para-aminobenzoate synthasecomponent I {ECO:0000313|EMBL:EZP26697.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
anthranilate/para-aminobenzoate synthase component I
SCN18_25_8_15_R2_B_scaffold_1822_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

10868..12019
DNA (1152bp) protein (384aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI000344D835
ispG; hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1822_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12056..13084)
DNA (1029bp) protein (343aa)
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7)
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=Microbacterium paraoxydans RepID=UPI00037F0BB4
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:EZP26699.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCN18_25_8_15_R2_B_scaffold_1822_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13081..13761)
DNA (681bp) protein (227aa)
Regulatory protein GntR HTH n=2 Tax=Microbacterium RepID=H8E245_9MICO
GntR family transcriptional regulator {ECO:0000313|EMBL:EXJ51228.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
GntR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1822_13
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(14098..14760)
DNA (663bp) protein (221aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
peptidase C15 n=1 Tax=Microbacterium sp. B19 RepID=UPI0003490289
pyrrolidone-carboxylate peptidase
SCN18_25_8_15_R2_B_scaffold_1822_14
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(14751..15530)
DNA (780bp) protein (260aa)
NADH:ubiquinone oxidoreductase subunit 4 (Chain M) {ECO:0000313|EMBL:CDK01391.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
NADH:ubiquinone oxidoreductase subunit 4 (Chain M) id=7719295 bin=CNBR_ACT species=Microbacterium laevaniformans genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
NADH:ubiquinone oxidoreductase subunit 4 (chain M)
SCN18_25_8_15_R2_B_scaffold_1822_15
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


15603..17357
DNA (1755bp) protein (585aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
prolyl-tRNA synthetase n=1 Tax=Microbacterium yannicii RepID=UPI00031F0DA1
proS; prolyl-tRNA synthetase
SCN18_25_8_15_R2_B_scaffold_1822_16
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17380..17574)
DNA (195bp) protein (65aa)
membrane protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A69D0
Uncharacterized protein {ECO:0000313|EMBL:CDK01388.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
Displaying 16 items

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