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SCN18_25_8_15_R2_B_scaffold_2600

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2600_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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3..254
DNA (252bp) protein (84aa)
SCN18_25_8_15_R2_B_scaffold_2600_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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251..598
DNA (348bp) protein (116aa)
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N7B7_MICTS
ribose/xylose/arabinose/galactoside ABC transporters, permease components
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components {ECO:0000313|EMBL:BAJ75549.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_2600_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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695..1630
DNA (936bp) protein (312aa)
AraC family transcriptional regulator n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262AF3F
Transcriptional regulator EutR {ECO:0000313|EMBL:KJQ55821.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
AraC family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2600_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1724..2044
DNA (321bp) protein (107aa)
ATP-dependent DNA ligase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N787_MICTS
ATP-dependent DNA ligase
ATP-dependent DNA ligase {ECO:0000313|EMBL:KEP75576.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCN18_25_8_15_R2_B_scaffold_2600_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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2131..2991
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BC830
Oxidoreductase {ECO:0000313|EMBL:EYT60121.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
short chain dehydrogenase/reductase family oxidoreductase
SCN18_25_8_15_R2_B_scaffold_2600_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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3399..4460
DNA (1062bp) protein (354aa)
Cysteine synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGS7_MICTS
cysteine synthase
Cysteine synthase {ECO:0000313|EMBL:BAJ75376.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_2600_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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4457..5629
DNA (1173bp) protein (391aa)
cystathionine gamma-synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378AC0D
Cystathionine gamma-synthase {ECO:0000313|EMBL:KEP75727.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
metB; cystathionine beta-lyase/cystathionine gamma-synthase
SCN18_25_8_15_R2_B_scaffold_2600_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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5723..7198
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035D962D
Di-/tricarboxylate transporter {ECO:0000313|EMBL:KHK98583.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
di-/tricarboxylate transporter
SCN18_25_8_15_R2_B_scaffold_2600_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(7297..8373)
DNA (1077bp) protein (359aa)
Levodione reductase {ECO:0000313|EMBL:KJL37798.1}; EC=1.1.1.- {ECO:0000313|EMBL:KJL37798.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
short-chain dehydrogenase n=1 Tax=Agromyces subbeticus RepID=UPI0003B6F0F0
putative short-chain dehydrogenase
SCN18_25_8_15_R2_B_scaffold_2600_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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8499..8816
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFT7_MICTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73982.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_2600_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(8850..9311)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030EB19B
DNA-directed RNA polymerase, sigma subunit (Sigma70/sigma32) (Modular protein) {ECO:0000313|EMBL:CDK01817.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
SCN18_25_8_15_R2_B_scaffold_2600_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(9386..10789)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002EB1E48
Putative adenosylmethionine-8-amino-7-oxononanoate transaminase {ECO:0000313|EMBL:ERK70797.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2600_13
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(10916..13210)
DNA (2295bp) protein (765aa)
Putative beta-glycosidase {ECO:0000313|EMBL:CAN00321.1}; EC=3.2.1.- {ECO:0000313|EMBL:CAN00321.1};; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000366C880
bglX; putative beta-glycosidase
SCN18_25_8_15_R2_B_scaffold_2600_14
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13314..14207)
DNA (894bp) protein (298aa)
thiamine ABC transporter ATP-binding protein n=2 Tax=Microbacterium RepID=UPI00037D1055
Multiple sugar transport system permease {ECO:0000313|EMBL:EZP28338.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
binding-protein-dependent transport systems inner membrane component
SCN18_25_8_15_R2_B_scaffold_2600_15
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(14204..15217)
DNA (1014bp) protein (338aa)
sugar ABC transporter permease n=2 Tax=Microbacterium RepID=UPI00036CF477
Putative sugar ABC transporter, permease component {ECO:0000313|EMBL:EZP28337.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
putative sugar ABC transporter, permease component
SCN18_25_8_15_R2_B_scaffold_2600_16
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(15220..16512)
DNA (1293bp) protein (431aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI000365EC7D
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EZP28336.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
family 1 extracellular solute-binding protein
SCN18_25_8_15_R2_B_scaffold_2600_17
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

16681..17679
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI00037D5039
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ERK69827.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
LacI family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2600_18
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(17651..18880)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031DDDEB
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:EZP28352.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
transcriptional regulator/sugar kinase
SCN18_25_8_15_R2_B_scaffold_2600_19
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(18940..19080)
DNA (141bp) protein (47aa)
Displaying 19 items

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