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SCN18_25_8_15_R2_B_scaffold_4478

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_4478_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1..1062
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002FDA5D0
Uncharacterized protein {ECO:0000313|EMBL:EXJ50489.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
periplasmic solute-binding protein
SCN18_25_8_15_R2_B_scaffold_4478_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1056..1931
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003820440
Shikimate dehydrogenase {ECO:0000313|EMBL:KHK98982.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
shikimate 5-dehydrogenase
SCN18_25_8_15_R2_B_scaffold_4478_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1936..3162
DNA (1227bp) protein (409aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
chorismate synthase n=1 Tax=Microbacterium yannicii RepID=UPI0003819067
chorismate synthase
SCN18_25_8_15_R2_B_scaffold_4478_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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3149..3721
DNA (573bp) protein (191aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
shikimate kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D9E87
shikimate kinase
SCN18_25_8_15_R2_B_scaffold_4478_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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3718..4809
DNA (1092bp) protein (364aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
3-dehydroquinate synthase n=1 Tax=Microbacterium yannicii RepID=UPI0002DD11AB
aroB; 3-dehydroquinate synthetase
SCN18_25_8_15_R2_B_scaffold_4478_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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4852..5319
DNA (468bp) protein (156aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
3-dehydroquinate dehydratase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037F7CE1
aroQ; 3-dehydroquinate dehydratase II
SCN18_25_8_15_R2_B_scaffold_4478_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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5381..5941
DNA (561bp) protein (187aa)
elongation factor P n=1 Tax=Microbacterium yannicii RepID=UPI000314D9EB
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
efp; translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
SCN18_25_8_15_R2_B_scaffold_4478_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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5945..6355
DNA (411bp) protein (137aa)
N utilization substance protein B homolog n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFL1_MICTS
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
nusB; transcription termination factor
SCN18_25_8_15_R2_B_scaffold_4478_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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6415..6762
DNA (348bp) protein (116aa)
Superfamily II DNA/RNA helicase, SNF2 family n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFL2_MICTS
superfamily II DNA/RNA helicase, SNF2 family
Superfamily II DNA/RNA helicase, SNF2 family {ECO:0000313|EMBL:BAJ76494.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Displaying 9 items

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