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SCN18_25_8_15_R2_B_scaffold_2021_11

Organism: SCN18_25_8_15_R2_B_CN-SCN_Microbacterium_18x_70_9

near complete RP 46 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38
Location: comp(8952..9503)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026274DC similarity UNIREF
DB: UNIREF100
  • Identity: 35.2
  • Coverage: 182.0
  • Bit_score: 81
  • Evalue 7.90e-13
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:CCH74957.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.1
  • Coverage: 184.0
  • Bit_score: 79
  • Evalue 4.20e-12

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 552
GTGCTGGAGGCCGGCACGTGGATCCTCGAAAACGAGGGGCGCGATGCCCTGACAATCACCGGGGTGTGCGAACGCGCGCGCGTGACACCGATGGCGATTTATAGGCGGGTCGACGGGTTGGCCGGGCTCTTCTGGGCGATCTACGACCGCGGCATGAAAGCGGTTGTCGCAACGTATGAGCAGGAACTCGCCCGCGCAGCGGCGTTCGCGCCGGACAGCCCGGCGCGAGTCGCCCAAGTCGTTACCGCGGTCGCCGAGACCTTCGAGCGACACGCTCCCTTTCTTCATCAGATCGTCAACTACTCGACGACCGATCCCGCTCTTTCGCAGCGGGGCTCAGATGAGTCGCTGGTCCTGGTCGAGCGGGTCGCGCACCTGCTGCAGGGCGACGATTCGACTGCGGCATGGGATGTCGCGCGAATGCTCCACCAGGAGTGCGTGTTCCGCGCGATGTACGGAGACCGGTGGCTCTCCCGGGAGCCCGAACTCTTCGGTCAATTCGTCGAACGGCTGCGACTCATGGCGTTCTCACGCCTGAGAGTGAGCCGATAG
PROTEIN sequence
Length: 184
VLEAGTWILENEGRDALTITGVCERARVTPMAIYRRVDGLAGLFWAIYDRGMKAVVATYEQELARAAAFAPDSPARVAQVVTAVAETFERHAPFLHQIVNYSTTDPALSQRGSDESLVLVERVAHLLQGDDSTAAWDVARMLHQECVFRAMYGDRWLSREPELFGQFVERLRLMAFSRLRVSR*