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SCN18_25_8_15_R2_B_scaffold_2021

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2021_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3..95)
DNA (93bp) protein (31aa)
SCN18_25_8_15_R2_B_scaffold_2021_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(92..706)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037B7A78
Putative Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:CCH74969.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2021_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(703..1821)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI00035CF3EC
Uncharacterized protein {ECO:0000313|EMBL:KHK97456.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
monooxygenase FAD-binding protein
SCN18_25_8_15_R2_B_scaffold_2021_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(1912..2835)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI0003797196
Transcriptional regulator {ECO:0000313|EMBL:EDY55406.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
LysR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2021_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

3002..3952
DNA (951bp) protein (317aa)
oxidoreductase n=1 Tax=Nocardiopsis synnemataformans RepID=UPI00034B4E69
Oxidoreductase {ECO:0000313|EMBL:KHK97572.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
oxidoreductase
SCN18_25_8_15_R2_B_scaffold_2021_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

3958..4725
DNA (768bp) protein (256aa)
ditB; protein DitB (EC:1.1.1.100)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036ABA2C
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase {ECO:0000313|EMBL:CCH74953.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
SCN18_25_8_15_R2_B_scaffold_2021_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4800..6290)
DNA (1491bp) protein (497aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
carboxylesterase n=1 Tax=Streptomyces chartreusis RepID=UPI000262D9A2
SCD95A.31; carboxylesterase
SCN18_25_8_15_R2_B_scaffold_2021_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6349..7566)
DNA (1218bp) protein (406aa)
cytochrome P450 (EC:1.14.99.28)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003770FE1
Cytochrome P450 {ECO:0000313|EMBL:EFC81901.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
SCN18_25_8_15_R2_B_scaffold_2021_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7592..8539)
DNA (948bp) protein (316aa)
Putative oxidoreductase n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5EGQ7_NOCAS
Putative oxidoreductase {ECO:0000313|EMBL:GAD85576.1}; TaxID=1110697 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
phthalate 4,5-dioxygenase reductase subunit
SCN18_25_8_15_R2_B_scaffold_2021_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

8665..8949
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q6L4_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD44257.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
SCN18_25_8_15_R2_B_scaffold_2021_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8952..9503)
DNA (552bp) protein (184aa)
TetR family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026274DC
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:CCH74957.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
SCN18_25_8_15_R2_B_scaffold_2021_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

9716..11131
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036ED547
Oxidoreductase {ECO:0000313|EMBL:EDY55408.2}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
FAD linked oxidase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2021_13
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

11131..11619
DNA (489bp) protein (163aa)
ribose 5-phosphate isomerase (EC:5.3.1.6)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LLB9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ERG63104.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
SCN18_25_8_15_R2_B_scaffold_2021_14
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

11616..12545
DNA (930bp) protein (310aa)
Bifunctional protein: zinc-containing alcohol dehydrogenase n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XMT3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KHK96396.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
NADPH:quinone reductase
SCN18_25_8_15_R2_B_scaffold_2021_15
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

12556..13353
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037A9BB4
Short-chain dehydrogenase {ECO:0000313|EMBL:EQB04222.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
putative oxidoreductase
SCN18_25_8_15_R2_B_scaffold_2021_16
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

13526..14713
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003715CCB
ABC-type sugar transport system periplasmic component-like protein {ECO:0000313|EMBL:CDJ99645.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
sugar ABC transporter periplasmic protein
SCN18_25_8_15_R2_B_scaffold_2021_17
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(14918..15739)
DNA (822bp) protein (274aa)
IS110 family transposase n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2K4H4_STRHJ
IS110 family transposase
IS110 family transposase {ECO:0000313|EMBL:AEY85360.1}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
Displaying 17 items

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