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SCN18_25_8_15_R2_B_scaffold_771

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_771_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12..950)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037877BA
Uncharacterized protein {ECO:0000313|EMBL:KKB80849.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
BadF/BadG/BcrA/BcrD type ATPase
SCN18_25_8_15_R2_B_scaffold_771_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(947..1618)
DNA (672bp) protein (224aa)
N-acylglucosamine-6-phosphate 2-epimerase {ECO:0000256|SAAS:SAAS00074327}; EC=5.1.3.9 {ECO:0000256|SAAS:SAAS00074327};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037917C2
N-acetylmannosamine-6-phosphate 2-epimerase
SCN18_25_8_15_R2_B_scaffold_771_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1615..2478)
DNA (864bp) protein (288aa)
ABC-type sugar transport system, permease component n=1 Tax=Rhizobium sp. CF080 RepID=J3CHH3_9RHIZ
Sugar ABC transporter permease {ECO:0000313|EMBL:KFL32235.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC-type sugar transport system, permease component
SCN18_25_8_15_R2_B_scaffold_771_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2475..3395)
DNA (921bp) protein (307aa)
Permease component of ABC-type sugar transporter n=1 Tax=Rhizobium sp. CF080 RepID=J2JUF4_9RHIZ
Sugar ABC transporter permease {ECO:0000313|EMBL:KFL32234.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Binding-protein-dependent transport system inner membrane component
SCN18_25_8_15_R2_B_scaffold_771_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3592..4833)
DNA (1242bp) protein (414aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J3CH14_9RHIZ
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL32233.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
N-Acetyl-D-glucosamine ABC transport system sugar-binding protein
SCN18_25_8_15_R2_B_scaffold_771_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4880..5944)
DNA (1065bp) protein (355aa)
mtlK; sugar ABC transporter ATPases (EC:3.6.3.25)
ATP-binding protein of mannitol ABC transporter n=2 Tax=Ketogulonicigenium vulgare RepID=E3EY21_KETVY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL32232.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_771_7
unknown

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comp(6038..6166)
DNA (129bp) protein (43aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_771_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6489..7337)
DNA (849bp) protein (283aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. AP16 RepID=J2WHS9_9RHIZ
RpiR family transcriptional regulator {ECO:0000313|EMBL:KFL32231.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Putative DNA-binding transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_771_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7587..8519
DNA (933bp) protein (311aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BR21_9RHIZ
murQ; N-acetylmuramic acid 6-phosphate etherase
SCN18_25_8_15_R2_B_scaffold_771_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8698..9753)
DNA (1056bp) protein (352aa)
trehalose/maltose ABC transporter nucleotide binding/ATPase (EC:3.6.3.19)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037E0168
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL32229.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_771_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9764..12958)
DNA (3195bp) protein (1065aa)
Alpha-mannosidase n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CPJ6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFL32228.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
alpha-mannosidase
SCN18_25_8_15_R2_B_scaffold_771_12
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12955..13767)
DNA (813bp) protein (271aa)
ABC transporter, permease protein n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CPJ7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB77822.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
sugar ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_771_13
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13767..14657)
DNA (891bp) protein (297aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CPJ8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB77823.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
integral membrane transport protein
SCN18_25_8_15_R2_B_scaffold_771_14
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14787..16103)
DNA (1317bp) protein (439aa)
Putative extracellular solute-binding protein n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CPJ9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKC37775.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
CUT1 family carbohydrate ABC transporter substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_771_15
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16380..17411
DNA (1032bp) protein (344aa)
HTH-type transcriptional regulator AglR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5M4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL32226.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
LacI family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_771_16
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17416..18627)
DNA (1212bp) protein (404aa)
OpgC protein n=1 Tax=Citreicella sp. SE45 RepID=D0D948_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFL32225.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_771_17
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18620..20371)
DNA (1752bp) protein (584aa)
Glucosyltransferase MdoH n=1 Tax=Nitratireductor indicus C115 RepID=K2NQA6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB77826.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
glucosyltransferase MdoH
SCN18_25_8_15_R2_B_scaffold_771_18
unknown

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comp(20384..20518)
DNA (135bp) protein (45aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_771_19
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20515..22149)
DNA (1635bp) protein (545aa)
Glucans biosynthesis protein G n=4 Tax=Rhodobacter RepID=OPGG_RHOS4
Uncharacterized protein {ECO:0000313|EMBL:KFL32224.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
mdoG; glucan biosynthesis protein G
SCN18_25_8_15_R2_B_scaffold_771_20
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22413..23927)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PSU6_9RHIZ
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KFL31225.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
C4-dicarboxylate ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_771_21
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23934..24386)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128W8_POLSJ
Uncharacterized protein {ECO:0000313|EMBL:KFL31224.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_771_22
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24554..25513)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EAD5F4
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL31223.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative tripartite tricarboxylate transporter, TctC family
SCN18_25_8_15_R2_B_scaffold_771_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25812..26747
DNA (936bp) protein (312aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Nitratireductor indicus C115 RepID=K2PAK6_9RHIZ
Dihydrodipicolinate synthase {ECO:0000313|EMBL:KFL31222.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Dihydrodipicolinate synthase
SCN18_25_8_15_R2_B_scaffold_771_24
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26811..27806
DNA (996bp) protein (332aa)
PTS-dependent dihydroxyacetone kinase,dihydroxyacetone binding subunit dhaK n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AUH3_AZOBR
Dihydroxyacetone kinase {ECO:0000313|EMBL:KFL31221.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
dhaK; PTS-dependent dihydroxyacetone kinase,dihydroxyacetone binding subunit dhaK
SCN18_25_8_15_R2_B_scaffold_771_25
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27810..28445
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003606D4C
Dak phosphatase {ECO:0000313|EMBL:KFL31220.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Dak phosphatase
SCN18_25_8_15_R2_B_scaffold_771_26
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28526..29323
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NY71_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:KFL31219.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_771_27
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(29420..30100)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1X3N2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL31218.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Demethylmenaquinone methyltransferase
SCN18_25_8_15_R2_B_scaffold_771_28
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(30105..30830)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XKH9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL31217.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_771_29
SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, Kapabacteria

Not on your lists

comp(30824..31642)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YXL0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL31216.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_771_30
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31796..33247)
DNA (1452bp) protein (484aa)
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KFL32223.1}; EC=1.2.1.16 {ECO:0000313|EMBL:KFL32223.1};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD (EC:1.2.1.79)
succinate-semialdehyde dehdyrogenase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003812FB6
Displaying items 1-30 of 41 in total

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