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SCN18_25_8_15_R2_B_scaffold_5114

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_5114_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..148)
DNA (147bp) protein (49aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC38711.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
SCN18_25_8_15_R2_B_scaffold_5114_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(492..1037)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R856_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL32546.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_5114_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1257..1988)
DNA (732bp) protein (244aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
methionine sulfoxide reductase A (EC:1.8.4.11)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003785679
SCN18_25_8_15_R2_B_scaffold_5114_trna_2
unknown

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comp(2139..2218)
DNA (80bp)
transferRNA Asp
SCN18_25_8_15_R2_B_scaffold_5114_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2682..3023
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISN9_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:CDP50849.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_5114_trna_1
unknown

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comp(3034..3106)
DNA (73bp)
transferRNA Val
SCN18_25_8_15_R2_B_scaffold_5114_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3289..3561)
DNA (273bp) protein (91aa)
DNA-binding protein HU-beta n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAH1_PELHB
Transcriptional regulator HU subunit alpha {ECO:0000313|EMBL:KFL32548.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
DNA-binding protein HU-beta
SCN18_25_8_15_R2_B_scaffold_5114_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3748..4947)
DNA (1200bp) protein (400aa)
PREDICTED: major facilitator superfamily domain-containing protein 10-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C12303
MFS transporter {ECO:0000313|EMBL:KFL32549.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
tetA; TetA
SCN18_25_8_15_R2_B_scaffold_5114_7
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5067..5912)
DNA (846bp) protein (282aa)
Tetracycline resistance protein n=2 Tax=Agrobacterium tumefaciens complex RepID=Q7CUB3_AGRT5
MFS transporter {ECO:0000313|EMBL:KFL32550.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
tetA; tetracycline resistance protein
Displaying 9 items

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