ggKbase home page

SCN18_25_8_15_R2_B_scaffold_3056

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3056_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

206..514
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF47_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29327.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3056_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

674..2050
DNA (1377bp) protein (459aa)
Glutathione reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF48_PELHB
Glutathione reductase {ECO:0000313|EMBL:KFL29326.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glutathione reductase
SCN18_25_8_15_R2_B_scaffold_3056_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2303..2995
DNA (693bp) protein (231aa)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF49_PELHB
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KFL29325.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II
SCN18_25_8_15_R2_B_scaffold_3056_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3086..3679
DNA (594bp) protein (198aa)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF49_PELHB
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KFL29325.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II
SCN18_25_8_15_R2_B_scaffold_3056_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3793..5718
DNA (1926bp) protein (642aa)
Signal transduction histidine kinase {ECO:0000313|EMBL:ABE62041.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABE62041.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Signal transduction histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP06_NITHX
signal transduction histidine kinase
SCN18_25_8_15_R2_B_scaffold_3056_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5760..6185)
DNA (426bp) protein (142aa)
response regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B44109
Uncharacterized protein {ECO:0000313|EMBL:KFL29324.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
response regulator CheY-like domain-containing protein
SCN18_25_8_15_R2_B_scaffold_3056_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6406..7401
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF50_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29323.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3056_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7542..9209
DNA (1668bp) protein (556aa)
NAD synthetase {ECO:0000313|EMBL:KFL29322.1}; EC=6.3.5.1 {ECO:0000313|EMBL:KFL29322.1};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
NAD synthetase / glutamine amidotransferase chain of NAD synthetase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF53_PELHB
NAD synthetase
SCN18_25_8_15_R2_B_scaffold_3056_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9206..10225
DNA (1020bp) protein (340aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Glutamate--tRNA ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF54_PELHB
glutamyl-tRNA(Gln) synthetase
Displaying 9 items

View Taxonomy