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SCN18_25_8_15_R2_B_scaffold_3151

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3151_1
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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118..942
DNA (825bp) protein (275aa)
Putative transcriptional regulator n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2Q9E0_9BRAD
XRE family transcriptional regulator {ECO:0000313|EMBL:KKC37782.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
XRE family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_3151_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(995..2341)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00035DB9BA
Multi antimicrobial extrusion protein MatE {ECO:0000313|EMBL:EGP55812.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
multi anti extrusion protein MatE
SCN18_25_8_15_R2_B_scaffold_3151_3
Enterobacter cloacae_SCNPILOT_CONT_500_P_Enterobacter_55_6.1, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2558..3016)
DNA (459bp) protein (153aa)
Transcriptional regulator, AsnC family n=3 Tax=Serratia RepID=G0BCX4_SERSA
AsnC family transcriptional regulator
Complete genome; segment 14/17 {ECO:0000313|EMBL:CAE16525.1}; TaxID=243265 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus luminescens subsp. laumondii (strain TT01).;"
SCN18_25_8_15_R2_B_scaffold_3151_4
Enterobacter cloacae_SCNPILOT_CONT_500_P_Enterobacter_55_6.1, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3113..3727
DNA (615bp) protein (205aa)
lysine transporter LysE n=1 Tax=gamma proteobacterium WG36 RepID=UPI00036EBA17
Putative threonine efflux protein {ECO:0000313|EMBL:KEZ16868.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
lysE type translocator family protein
SCN18_25_8_15_R2_B_scaffold_3151_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4047..5831
DNA (1785bp) protein (595aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:KFL30931.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KFL30931.1};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
DNA polymerase III subunits gamma and tau n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFT3_PELHB
DNA polymerase III subunits gamma and tau
SCN18_25_8_15_R2_B_scaffold_3151_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5828..6151
DNA (324bp) protein (108aa)
Nucleoid-associated protein ATCR1_16298 n=2 Tax=Rhizobium radiobacter RepID=G6XX73_RHIRD
Nucleoid-associated protein VW35_18080 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3151_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6388..6861
DNA (474bp) protein (158aa)
Recombination protein RecR n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFT5_PELHB
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
recombination protein RecR
SCN18_25_8_15_R2_B_scaffold_3151_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6968..8377)
DNA (1410bp) protein (470aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Sensor protein basS/pmrB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE34_PELHB
sensor protein basS/pmrB
SCN18_25_8_15_R2_B_scaffold_3151_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8379..9050)
DNA (672bp) protein (224aa)
Response regulator in two-component regulatory system with PhoQ n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE33_PELHB
XRE family transcriptional regulator {ECO:0000313|EMBL:KFL30928.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
response regulator in two-component regulatory system with PhoQ
SCN18_25_8_15_R2_B_scaffold_3151_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9154..9885)
DNA (732bp) protein (244aa)
Peptidase Do n=3 Tax=Brucella abortus RepID=N7A5L7_BRUAO
Uncharacterized protein {ECO:0000313|EMBL:KFL30927.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
peptidase Do family protein
Displaying 10 items

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