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SCN18_25_8_15_R2_B_scaffold_3248

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3248_1
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1259)
DNA (1257bp) protein (419aa)
glutathione import ATP-binding protein (EC:3.6.3.-)
ABC transporter related n=3 Tax=Ochrobactrum intermedium RepID=C4WP38_9RHIZ
ABC transporter {ECO:0000313|EMBL:KFL32857.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_3248_2
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1256..1768)
DNA (513bp) protein (171aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JVM5_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KFL32858.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
binding--dependent transport system inner membrane component family protein
SCN18_25_8_15_R2_B_scaffold_3248_3
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1723..2088)
DNA (366bp) protein (122aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3HXX4_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KFL32858.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
binding--dependent transport system inner membrane component family protein
SCN18_25_8_15_R2_B_scaffold_3248_4
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2085..3032)
DNA (948bp) protein (316aa)
ABC transporter permease n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HF39_RHIRD
ABC transporter permease {ECO:0000313|EMBL:KFL32859.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
peptide/nickel transport system permease protein
SCN18_25_8_15_R2_B_scaffold_3248_5
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3032..4603)
DNA (1572bp) protein (524aa)
ABC transporter substrate-binding protein n=1 Tax=Ochrobactrum anthropi RepID=UPI0002886AF2
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL32860.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
bacterial extracellular solute-binding s, 5 Middle family protein
SCN18_25_8_15_R2_B_scaffold_3248_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4869..5180
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KBE6_9RHIZ
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:KFL32861.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative membrane protein
SCN18_25_8_15_R2_B_scaffold_3248_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5181..6071)
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X2N4_OCHA4
LysR family transcriptional regulator {ECO:0000313|EMBL:KFL32862.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
LysR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_3248_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6263..7612
DNA (1350bp) protein (450aa)
Leucine aminopeptidase 2, chloroplastic {ECO:0000256|SAAS:SAAS00070899}; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00279693};; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00070892};; Leucine aminopeptidase 3, chloroplastic {ECO:0000256|SAAS:SAAS00070897}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Peptidase B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS9_PELHB
peptidase B
SCN18_25_8_15_R2_B_scaffold_3248_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7673..8605
DNA (933bp) protein (311aa)
UPI0003CF9FE8 related cluster n=1 Tax=unknown RepID=UPI0003CF9FE8
Uncharacterized protein {ECO:0000313|EMBL:KFL30990.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ybfA; hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3248_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8602..9273)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003733385
Uncharacterized protein {ECO:0000313|EMBL:KKB76702.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3248_11
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9347..9607)
DNA (261bp) protein (87aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFT0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30989.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
D-3-phosphoglycerate dehydrogenase
Displaying 11 items

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