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SCN18_25_8_15_R2_B_scaffold_3298

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3298_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..236
DNA (234bp) protein (78aa)
Putative membrane protein hemolysin III-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCM0_PELHB
DNA-binding protein {ECO:0000313|EMBL:KFL31701.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative membrane protein hemolysin III-like protein
SCN18_25_8_15_R2_B_scaffold_3298_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(240..698)
DNA (459bp) protein (153aa)
Exported protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6L2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31700.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3298_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(740..1363)
DNA (624bp) protein (208aa)
Cold shock protein CspB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6L1_PELHB
Cold-shock protein {ECO:0000313|EMBL:KFL31699.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cold shock protein CspB
SCN18_25_8_15_R2_B_scaffold_3298_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1550..1966
DNA (417bp) protein (139aa)
Lactoylglutathione lyase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6L0_PELHB
Glyoxalase {ECO:0000313|EMBL:KFL31698.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
lactoylglutathione lyase
SCN18_25_8_15_R2_B_scaffold_3298_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2192..2668
DNA (477bp) protein (159aa)
Peptidase M15A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6K9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31697.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
peptidase M15A
SCN18_25_8_15_R2_B_scaffold_3298_trna_1
unknown

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2760..2831
DNA (72bp)
transferRNA Glu
SCN18_25_8_15_R2_B_scaffold_3298_trna_2
unknown

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2889..2960
DNA (72bp)
transferRNA Glu
SCN18_25_8_15_R2_B_scaffold_3298_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3131..4015)
DNA (885bp) protein (295aa)
LysR family transcriptional regulator n=1 Tax=Ketogulonicigenium vulgare (strain WSH-001) RepID=F9Y5L8_KETVW
LysR family transcriptional regulator {ECO:0000313|EMBL:KFL31525.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
LysR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_3298_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4108..5604
DNA (1497bp) protein (499aa)
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Ketogulonicigenium vulgare (strain Y25) RepID=E3F1P2_KETVY
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KFL31524.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
methylmalonate-semialdehyde dehydrogenase
SCN18_25_8_15_R2_B_scaffold_3298_8
SCNPILOT_CONT_750_P_Aeromonadales_61_5_9, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5745..6914
DNA (1170bp) protein (390aa)
Putative reductase WH91_10970 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
Putative reductase C207_02308 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IL45_9BRAD
Short-chain alcohol dehydrogenase family
SCN18_25_8_15_R2_B_scaffold_3298_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7010..8005)
DNA (996bp) protein (332aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VWJ3_9RHIZ
AraC family transcriptional regulator {ECO:0000313|EMBL:KFL31687.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
AraC family transcriptional regulator protein
SCN18_25_8_15_R2_B_scaffold_3298_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8002..8565)
DNA (564bp) protein (188aa)
hydrolase n=2 Tax=Rhizobium RepID=UPI00036F4202
Hydrolase {ECO:0000313|EMBL:KFL31686.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
isochorismatase hydrolase
SCN18_25_8_15_R2_B_scaffold_3298_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8739..9380
DNA (642bp) protein (214aa)
Alpha/beta hydrolase superfamily enzyme, predicted hydrolase n=1 Tax=Rhizobium sp. CF080 RepID=J2HZ23_9RHIZ
Alpha/beta hydrolase {ECO:0000313|EMBL:KKB10970.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
Displaying 13 items

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