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SCN18_25_8_15_R2_B_scaffold_3879

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3879_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..84)
DNA (84bp) protein (28aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL32300.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_3879_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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156..1196
DNA (1041bp) protein (347aa)
UPF0176 protein KKY_3710 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBQ1_PELHB
UPF0176 protein JP75_04935 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
rhodanese domain-containing protein
SCN18_25_8_15_R2_B_scaffold_3879_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1193..1507)
DNA (315bp) protein (105aa)
XRE family transcriptional regulator n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003617F2C
XRE family transcriptional regulator {ECO:0000313|EMBL:KFL32298.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
XRE family plasmid maintenance system antidote protein
SCN18_25_8_15_R2_B_scaffold_3879_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1479..1763)
DNA (285bp) protein (95aa)
Plasmid maintenance system killer n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXB5_PARL1
Plasmid maintenance system killer protein {ECO:0000313|EMBL:KFL32297.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
plasmid maintenance system killer protein
SCN18_25_8_15_R2_B_scaffold_3879_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1885..2814
DNA (930bp) protein (310aa)
Transcriptional regulator, LysR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBP8_PELHB
LysR family transcriptional regulator {ECO:0000313|EMBL:KFL32296.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
LysR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_3879_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2837..4450
DNA (1614bp) protein (538aa)
FAD-dependent L-sorbose dehydrogenase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJL9_AGRRK
Sorbosone dehydrogenase {ECO:0000313|EMBL:KFL32295.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
FAD-dependent L-sorbose dehydrogenase
SCN18_25_8_15_R2_B_scaffold_3879_7
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4447..5301)
DNA (855bp) protein (285aa)
Transcriptional regulator, LytR/AlgR family n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DCB7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB08005.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
LytR/AlgR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_3879_8
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5322..5825
DNA (504bp) protein (168aa)
Mlr2123 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98J36_RHILO
Uncharacterized protein {ECO:0000313|EMBL:KKB77871.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3879_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5828..6808)
DNA (981bp) protein (327aa)
Putative transmembrane iron-regulated protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA66_PELHB
Membrane protein {ECO:0000313|EMBL:KFL32294.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative transmembrane iron-regulated protein
SCN18_25_8_15_R2_B_scaffold_3879_10
unknown

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6964..7203
DNA (240bp) protein (80aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_3879_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7322..7849)
DNA (528bp) protein (176aa)
D-amino acid dehydrogenase small subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF75_PELHB
Amino acid dehydrogenase {ECO:0000313|EMBL:KFL32293.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
D-amino acid dehydrogenase small subunit
Displaying 11 items

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