name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_25_8_15_R2_B_scaffold_1136_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1..591
|
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262B93C
Acetobacter tropicalis DNA, scaffold: scf_atr1_v1431, strain NBRC 16470, whole genome shotgun sequence {ECO:0000313|EMBL:GAL98784.1}; TaxID=104102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter tropicalis.;"
hypothetical protein
|
|
SCN18_25_8_15_R2_B_scaffold_1136_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(588..2144)
|
ABC transporter related protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y2D5_MESOW
Uncharacterized protein {ECO:0000313|EMBL:KFL30737.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
peptide/opine/nickel uptake family ABC transporter, ATP-binding protein
|
|
SCN18_25_8_15_R2_B_scaffold_1136_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2131..2979)
|
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036734BB
Peptide ABC transporter permease {ECO:0000313|EMBL:KFL30736.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
binding-protein-dependent transport systems inner membrane component
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|
SCN18_25_8_15_R2_B_scaffold_1136_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2976..3926)
|
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00035D3F11
Peptide ABC transporter {ECO:0000313|EMBL:KFL30735.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
dipeptide transport system permease DppB
|
|
SCN18_25_8_15_R2_B_scaffold_1136_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4017..5495)
|
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00035C35D0
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL30734.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
extracellular solute-binding protein
|
|
SCN18_25_8_15_R2_B_scaffold_1136_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5626..8259)
|
Two-component hybrid sensor and regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAC7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30733.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
two-component hybrid sensor and regulator
|
|
SCN18_25_8_15_R2_B_scaffold_1136_trna_1
unknown
|
Not on your lists |
8563..8636
|
transferRNA His
|
|
SCN18_25_8_15_R2_B_scaffold_1136_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8705..10774)
|
von Willebrand factor type A n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J040_POLGS
Uncharacterized protein {ECO:0000313|EMBL:KKB76632.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
von Willebrand factor A
|
|
SCN18_25_8_15_R2_B_scaffold_1136_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10822..11451)
|
ErfK/YbiS/YcfS/YnhG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30731.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ErfK/YbiS/YcfS/YnhG protein
|
|
SCN18_25_8_15_R2_B_scaffold_1136_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11934..12194
|
Uncharacterized protein {ECO:0000313|EMBL:KFL30730.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
|
|
SCN18_25_8_15_R2_B_scaffold_1136_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12367..13785
|
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Histidine--tRNA ligase n=1 Tax=alpha proteobacterium D323 RepID=M4HWZ9_9PROT
hisS; histidyl-tRNA synthetase
|
|
SCN18_25_8_15_R2_B_scaffold_1136_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13811..14875
|
Putative ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30728.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative ATP phosphoribosyltransferase regulatory subunit
|
|
SCN18_25_8_15_R2_B_scaffold_1136_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14928..15632
|
ATP phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00046302}; EC=2.4.2.17 {ECO:0000256|SAAS:SAAS00046302};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
ATP phosphoribosyltransferase catalytic subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD7_PELHB
ATP phosphoribosyltransferase
|
|
SCN18_25_8_15_R2_B_scaffold_1136_13
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15644..16393
|
Putative membrane protein YfcA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD9_PELHB
Membrane protein {ECO:0000313|EMBL:KFL30727.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative membrane protein YfcA
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SCN18_25_8_15_R2_B_scaffold_1136_14
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16394..16624)
|
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D6F4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB76627.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
|
|
SCN18_25_8_15_R2_B_scaffold_1136_15
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16759..18399)
|
60 kDa chaperonin n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAE1_PELHB
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
heat shock protein 60 family chaperone GroEL
|
|
SCN18_25_8_15_R2_B_scaffold_1136_16
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18447..18737)
|
10 kDa chaperonin n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CE33_9RHIZ
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
heat shock protein 60 family co-chaperone GroES
|
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SCN18_25_8_15_R2_B_scaffold_1136_17
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18904..19281
|
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMG1_METSB
Uncharacterized protein {ECO:0000313|EMBL:KKB76624.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
|
|
SCN18_25_8_15_R2_B_scaffold_1136_18
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19397..19591
|
Uncharacterized protein {ECO:0000313|EMBL:KKB76623.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
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SCN18_25_8_15_R2_B_scaffold_1136_19
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
19618..20583
|
UPI0003CF1835 related cluster n=1 Tax=unknown RepID=UPI0003CF1835
Membrane protein {ECO:0000313|EMBL:KFL30723.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
|
|
SCN18_25_8_15_R2_B_scaffold_1136_20
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20635..21012
|
membrane protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B47B1B
Uncharacterized protein {ECO:0000313|EMBL:KKB81409.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
|
|
SCN18_25_8_15_R2_B_scaffold_1136_21
Enterobacter cloacae_SCNPILOT_CONT_500_P_Enterobacter_55_6.1, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21042..21578)
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Putative bifunctional deaminase-reductase n=1 Tax=Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCDC 279-56) RepID=D5C870_ENTCC
Deaminase/reductase {ECO:0000313|EMBL:KFL30722.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
deaminase reductase
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SCN18_25_8_15_R2_B_scaffold_1136_22
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21780..23210)
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LuxO repressor protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAE6_PELHB
Fis family transcriptional regulator {ECO:0000313|EMBL:KFL30720.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
LuxO repressor protein
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SCN18_25_8_15_R2_B_scaffold_1136_23
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23407..24684
|
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAE8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30719.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
|
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SCN18_25_8_15_R2_B_scaffold_1136_24
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24775..25653
|
HAD superfamily protein involved in N-acetyl-glucosamine catabolism n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAE9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB76620.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
HAD superfamily protein involved in N-acetyl-glucosamine catabolism
|
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SCN18_25_8_15_R2_B_scaffold_1136_25
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25655..26629
|
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Riboflavin kinase / FMN adenylyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAF1_PELHB
riboflavin kinase/FMN adenylyltransferase
|
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SCN18_25_8_15_R2_B_scaffold_1136_26
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26796..28532
|
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Isoleucine--tRNA ligase n=2 Tax=Labrenzia RepID=U7FTR9_9RHOB
Isoleucine--tRNA ligase
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