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SCN18_25_8_15_R2_B_scaffold_1140

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1140_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..775
DNA (774bp) protein (258aa)
Basic membrane lipoprotein n=2 Tax=Ketogulonicigenium vulgare RepID=E3EYB7_KETVY
Basic membrane lipoprotein {ECO:0000313|EMBL:KKB82522.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
adenine nucleotide translocator 1
SCN18_25_8_15_R2_B_scaffold_1140_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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834..2378
DNA (1545bp) protein (515aa)
mglA3; sugar ABC-transporter, ATP-ase component (EC:3.6.3.17)
ABC-type sugar transport system n=2 Tax=Ketogulonicigenium vulgare RepID=E3EYB8_KETVY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL31079.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_1140_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2375..3469
DNA (1095bp) protein (365aa)
Inner-membrane translocator n=2 Tax=Ketogulonicigenium vulgare RepID=E3EYB9_KETVY
ABC transporter permease {ECO:0000313|EMBL:KFL31078.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1140_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3466..4416
DNA (951bp) protein (317aa)
ABC transporter permease protein n=1 Tax=Ketogulonicigenium vulgare (strain WSH-001) RepID=F9Y3Q0_KETVW
ABC transporter permease {ECO:0000313|EMBL:KFL31077.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1140_5
unknown

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4413..4559
DNA (147bp) protein (49aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1140_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4556..5908
DNA (1353bp) protein (451aa)
Guanine deaminase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJK8_AGRRK
Chlorohydrolase {ECO:0000313|EMBL:KFL31075.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
guaD; guanine deaminase
SCN18_25_8_15_R2_B_scaffold_1140_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5970..6182
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL31074.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_1140_8
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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comp(6461..7267)
DNA (807bp) protein (269aa)
Trifolitoxin immunity protein n=1 Tax=Rhizobium leguminosarum bv. trifolii RepID=TFXG_RHILT
Trifolitoxin immunity protein {ECO:0000313|EMBL:KFL31632.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative aminoglycoside phosphotransferase
SCN18_25_8_15_R2_B_scaffold_1140_9
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7308..8180)
DNA (873bp) protein (291aa)
UPI0003CDD0E5 related cluster n=1 Tax=unknown RepID=UPI0003CDD0E5
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
Rhodanese domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1140_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8272..9603)
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002E06B8C
Uncharacterized protein {ECO:0000313|EMBL:KKC41470.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase
SCN18_25_8_15_R2_B_scaffold_1140_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9671..10624)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030A4C55
Uncharacterized protein {ECO:0000313|EMBL:KKC41469.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
family 3 extracellular solute-binding protein
SCN18_25_8_15_R2_B_scaffold_1140_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10641..11453)
DNA (813bp) protein (271aa)
Putative amino acid ABC transporter ATP-binding protein n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0R1S0_9ACTO
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKC41512.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
ABC transporter ATPase
SCN18_25_8_15_R2_B_scaffold_1140_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11450..12331)
DNA (882bp) protein (294aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TXL1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB84581.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
putative polar amino acid ABC transporter, permease protein
SCN18_25_8_15_R2_B_scaffold_1140_14
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12535..13698)
DNA (1164bp) protein (388aa)
Monomeric sarcosine oxidase (MSOX) {ECO:0000313|EMBL:CDP51540.1}; EC=1.5.3.1 {ECO:0000313|EMBL:CDP51540.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000370045B
solA; N-methyltryptophan oxidase
SCN18_25_8_15_R2_B_scaffold_1140_15
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13982..15628
DNA (1647bp) protein (549aa)
ABC transporter periplasmic solute-binding protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AG48_RHIFH
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKC32613.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
ABC transporter periplasmic solute-binding protein
SCN18_25_8_15_R2_B_scaffold_1140_16
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15686..16630
DNA (945bp) protein (315aa)
Dipeptide transport system permease protein DppB n=1 Tax=Serratia fonticola AU-P3(3) RepID=U2NFD1_SERFO
Peptide ABC transporter permease {ECO:0000313|EMBL:KKC32614.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
peptide ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1140_17
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16627..17484
DNA (858bp) protein (286aa)
Peptide ABC transporter permease n=1 Tax=Serratia liquefaciens ATCC 27592 RepID=S5EM75_SERLI
Uncharacterized protein {ECO:0000313|EMBL:KKC32615.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
peptide ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1140_18
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17481..19142
DNA (1662bp) protein (554aa)
ABC transporter related n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BS85_DELAS
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKC32616.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
ABC transporter-like protein
SCN18_25_8_15_R2_B_scaffold_1140_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19139..20179
DNA (1041bp) protein (347aa)
Putative FMN-dependent luciferase-like monooxygenase, KPN_01858 family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWQ6_9RHIZ
Luciferase {ECO:0000313|EMBL:KKC32617.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1140_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20199..20828
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DA52_BRAJP
Avi_7170 family CMD domain-containing protein {ECO:0000313|EMBL:KKC32618.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1140_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20837..21421
DNA (585bp) protein (195aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UAX8_9RHIZ
CMD domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1140_22
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21555..22229
DNA (675bp) protein (225aa)
Putative glutathione S-transferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRJ4_RHITR
Glutathione S-transferase {ECO:0000313|EMBL:KFL31073.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative glutathione S-transferase
SCN18_25_8_15_R2_B_scaffold_1140_23
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22271..23293
DNA (1023bp) protein (341aa)
Peptidase, T4 family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LWS1_RUEPO
Peptidase T4 {ECO:0000313|EMBL:KKC35932.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
peptidase, T4 family
SCN18_25_8_15_R2_B_scaffold_1140_24
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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23296..24078
DNA (783bp) protein (261aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative Baf family transcriptional acitvator (EC:2.7.1.33)
Type III pantothenate kinase n=2 Tax=Desulfotomaculum RepID=F6B550_DESCC
SCN18_25_8_15_R2_B_scaffold_1140_25
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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24071..25300
DNA (1230bp) protein (410aa)
Peptidase ClpP n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M4A9_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KFL31071.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
SCN18_25_8_15_R2_B_scaffold_1140_26
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(25305..26258)
DNA (954bp) protein (318aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5M9J6_9RHIZ
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase {ECO:0000313|EMBL:KFL32852.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
SCN18_25_8_15_R2_B_scaffold_1140_27
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(26255..27355)
DNA (1101bp) protein (367aa)
Alkanesulfonate monooxygenase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5PML7_9RHIZ
Alkanesulfonate monooxygenase {ECO:0000313|EMBL:KFL32851.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Alkanesulfonate monooxygenase
SCN18_25_8_15_R2_B_scaffold_1140_28
unknown

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comp(27373..27510)
DNA (138bp) protein (46aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1140_29
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27673..28488)
DNA (816bp) protein (272aa)
glyosyl hydrolase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003678EF0
glyosyl hydrolase
Glycosyl hydrolase family 39 {ECO:0000313|EMBL:EJC83002.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
Displaying 29 items

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