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SCN18_25_8_15_R2_B_scaffold_1482

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1482_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..2026
DNA (2025bp) protein (675aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
Ribonuclease E n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAL2_PELHB
cytoplasmic axial filament protein CafA and ribonuclease G
SCN18_25_8_15_R2_B_scaffold_1482_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2248..2757
DNA (510bp) protein (170aa)
Putative transcriptional regulator n=1 Tax=Phyllobacterium sp. YR531 RepID=J2V3Z9_9RHIZ
DNA-binding protein {ECO:0000313|EMBL:KFL31849.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
DeoR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1482_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2819..3190
DNA (372bp) protein (124aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCP7_MESCW
Uncharacterized protein {ECO:0000313|EMBL:KFL31848.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCN18_25_8_15_R2_B_scaffold_1482_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3226..3726)
DNA (501bp) protein (167aa)
GNAT family protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U5L9_RHIRD
Acetyltransferase {ECO:0000313|EMBL:KFL31847.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
N-acetyltransferase GCN5
SCN18_25_8_15_R2_B_scaffold_1482_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3723..4874)
DNA (1152bp) protein (384aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB68_PELHB
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:KFL31846.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
aspartate/tyrosine/aromatic aminotransferase
SCN18_25_8_15_R2_B_scaffold_1482_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5033..5887
DNA (855bp) protein (285aa)
Putative outer membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB69_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31845.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative outer membrane protein
SCN18_25_8_15_R2_B_scaffold_1482_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6034..6489
DNA (456bp) protein (152aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB71_PELHB
SCN18_25_8_15_R2_B_scaffold_1482_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6522..7013
DNA (492bp) protein (164aa)
Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB72_PELHB
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KFL31843.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
biotin carboxyl carrier protein of acetyl-CoA carboxylase
SCN18_25_8_15_R2_B_scaffold_1482_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7026..8372
DNA (1347bp) protein (449aa)
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KFL31842.1}; EC=6.4.1.2 {ECO:0000313|EMBL:KFL31842.1};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Biotin carboxylase of acetyl-CoA carboxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB73_PELHB
biotin carboxylase of acetyl-CoA carboxylase
SCN18_25_8_15_R2_B_scaffold_1482_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8479..9114
DNA (636bp) protein (212aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB74_PELHB
leucyl/phenylalanyl-tRNA--protein transferase
SCN18_25_8_15_R2_B_scaffold_1482_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9101..9874
DNA (774bp) protein (258aa)
aminoglycoside 3''''-phosphotransferase n=1 Tax=Pseudomonas sp. CBZ-4 RepID=UPI000349ECFD
Uncharacterized protein {ECO:0000313|EMBL:KFL31840.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Aminoglycoside phosphotransferase
SCN18_25_8_15_R2_B_scaffold_1482_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9871..10368)
DNA (498bp) protein (166aa)
Transcription activator n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FY91_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFL31839.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transcription activator
SCN18_25_8_15_R2_B_scaffold_1482_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10390..11175)
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sinorhizobium meliloti (strain SM11) RepID=F7XD67_SINMM
Short-chain dehydrogenase {ECO:0000313|EMBL:KFL31838.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
short-chain dehydrogenase/reductase SDR family protein
SCN18_25_8_15_R2_B_scaffold_1482_14
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11261..11680)
DNA (420bp) protein (140aa)
Retrovirus-related POL polyprotein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB75_PELHB
Glycosyl hydrolase family 5 {ECO:0000313|EMBL:KFL31837.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
retrovirus-related POL polyprotein
SCN18_25_8_15_R2_B_scaffold_1482_15
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11687..12085)
DNA (399bp) protein (133aa)
NADH dehydrogenase {ECO:0000313|EMBL:KFL31836.1}; EC=1.6.99.3 {ECO:0000313|EMBL:KFL31836.1};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
NADH:ubiquinone oxidoreductase 17.2 kD subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB76_PELHB
NADH:ubiquinone oxidoreductase 17.2 kD subunit
SCN18_25_8_15_R2_B_scaffold_1482_16
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12307..12723
DNA (417bp) protein (139aa)
PhnB protein n=1 Tax=Curtobacterium sp. B18 RepID=UPI0003456EFC
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KFL31834.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glyoxalase family protein
SCN18_25_8_15_R2_B_scaffold_1482_17
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12838..13326
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YLR4_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:KFL31833.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_1482_18
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13323..14234)
DNA (912bp) protein (304aa)
gluconolactonase (EC:3.1.1.17)
gluconolactonase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00038095F1
Gluconolactonase {ECO:0000313|EMBL:KFL31832.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_1482_19
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14425..14910
DNA (486bp) protein (162aa)
SCP-like extracellular protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFK1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB77937.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCP-like extracellular protein
SCN18_25_8_15_R2_B_scaffold_1482_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14948..15121
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFJ9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31831.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1482_21
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15189..16349)
DNA (1161bp) protein (387aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFJ8_PELHB
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:KFC61787.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
D-alanyl-D-alanine carboxypeptidase
SCN18_25_8_15_R2_B_scaffold_1482_22
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16514..17083
DNA (570bp) protein (190aa)
DJ-1/PfpI family protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KAP3_PSEF5
Glutamine amidotransferase {ECO:0000313|EMBL:KFL31830.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
DJ-1/PfpI family protein
SCN18_25_8_15_R2_B_scaffold_1482_23
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17248..17640)
DNA (393bp) protein (131aa)
membrane protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036E563F
Uncharacterized protein {ECO:0000313|EMBL:KFL31828.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1482_24
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17737..18156
DNA (420bp) protein (140aa)
Transcriptional regulator, HxlR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFJ7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31827.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
HxlR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1482_25
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18277..19182)
DNA (906bp) protein (302aa)
ATPases involved in chromosome partitioning n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBZ2_PELHB
ATPase {ECO:0000313|EMBL:KKB77932.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
ATPase
SCN18_25_8_15_R2_B_scaffold_1482_26
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19287..19712)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBZ4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31826.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1482_27
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19709..20386)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ECE4C3
Uncharacterized protein {ECO:0000313|EMBL:KFL31825.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1482_28
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20726..22141)
DNA (1416bp) protein (472aa)
Magnesium transporter n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBZ5_PELHB
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
magnesium transporter
SCN18_25_8_15_R2_B_scaffold_1482_29
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22293..22661
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MIF5_RHISN
Uncharacterized protein {ECO:0000313|EMBL:KFL31823.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1482_30
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22661..23191
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFV7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31822.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
Displaying items 1-30 of 32 in total

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