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SCN18_25_8_15_R2_B_scaffold_1510

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1510_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(221..604)
DNA (384bp) protein (128aa)
TdcF n=2 Tax=Labrenzia RepID=U7GNF3_9RHOB
Endoribonuclease L-PSP {ECO:0000313|EMBL:KKB77895.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1510_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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802..2259
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEZ0_RHITR
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1510_3
Enterobacter cloacae_SCNPILOT_CONT_500_P_Enterobacter_55_6.1, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2445..2876)
DNA (432bp) protein (144aa)
Nucleoside triphosphatase NudI n=1 Tax=Enterobacter sp. MGH 25 RepID=V3Q784_9ENTR
Nucleoside triphosphatase {ECO:0000313|EMBL:KFL32132.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hydrolase, nudix family protein
SCN18_25_8_15_R2_B_scaffold_1510_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2977..4989)
DNA (2013bp) protein (671aa)
N-acetyl-beta-hexosaminidase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KLM6_RHILT
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:KFL32133.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
beta-N-acetylhexosaminidase
SCN18_25_8_15_R2_B_scaffold_1510_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5104..5970)
DNA (867bp) protein (289aa)
RpiR family transcriptional regulator n=1 Tax=Rhizobium meliloti RepID=UPI000363EAC5
Uncharacterized protein {ECO:0000313|EMBL:KFL32134.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
RpiR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1510_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6003..7079)
DNA (1077bp) protein (359aa)
ABC transporter nucleotide binding/ATPase (Maltose/maltodextrin) n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QZ64_9RHIZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB77776.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
malK; ABC transporter nucleotide binding/ATPase (maltose/maltodextrin)
SCN18_25_8_15_R2_B_scaffold_1510_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7172..8395)
DNA (1224bp) protein (408aa)
ABC transporter substrate-binding protein n=2 Tax=Rhizobium leguminosarum RepID=UPI00036C2CC6
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB77896.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
malE; ABC transporter substrate binding protein (maltose)
SCN18_25_8_15_R2_B_scaffold_1510_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8436..9401)
DNA (966bp) protein (322aa)
Probable sugar uptake ABC transporter, permease protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q1T3_RHIE6
ABC transporter permease {ECO:0000313|EMBL:KFL32136.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
sugar uptake ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1510_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9398..10285)
DNA (888bp) protein (296aa)
Sugar uptake ABC transporter, permease protein n=2 Tax=Rhizobium etli RepID=F2A6S6_RHIET
ABC transporter permease {ECO:0000313|EMBL:KKB08125.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
sugar uptake ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1510_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10299..11453)
DNA (1155bp) protein (385aa)
Putative dehydrogenase n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q732_9RHIZ
Oxidoreductase {ECO:0000313|EMBL:KFL32138.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1510_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11826..12320
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI000255861B
Uncharacterized protein {ECO:0000313|EMBL:KFL32139.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1510_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12558..13745
DNA (1188bp) protein (396aa)
Putative transmembrane protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MG09_RHIL3
Membrane protein {ECO:0000313|EMBL:KKB77780.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
major facilitator superfamily MFS-1
SCN18_25_8_15_R2_B_scaffold_1510_13
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13745..15178
DNA (1434bp) protein (478aa)
MlrC domain-containing protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037668A8
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1510_14
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15300..16067
DNA (768bp) protein (256aa)
DeoR family transcriptional regulator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q654_9RHIZ
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KFL32141.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glpR; glycerol-3-phosphate transcriptional regulator protein, DeoR family
SCN18_25_8_15_R2_B_scaffold_1510_15
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16085..16828
DNA (744bp) protein (248aa)
2-oxopent-4-enoate hydratase n=1 Tax=Gluconobacter frateurii RepID=UPI00029A6365
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:KFC71802.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1510_16
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16861..18591)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBM1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL32142.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1510_17
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18588..19706)
DNA (1119bp) protein (373aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBM0_PELHB
chemotaxis response regulator protein-glutamate methylesterase CheB
SCN18_25_8_15_R2_B_scaffold_1510_18
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19720..20598)
DNA (879bp) protein (293aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
Chemotaxis protein methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBL9_PELHB
chemotaxis protein CheR
SCN18_25_8_15_R2_B_scaffold_1510_19
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20653..21072)
DNA (420bp) protein (140aa)
Positive regulator of CheA protein activity (CheW) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBL8_PELHB
Chemotaxis protein CheW {ECO:0000313|EMBL:KFL32145.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Positive regulator of CheA protein activity (CheW)
SCN18_25_8_15_R2_B_scaffold_1510_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21085..22881)
DNA (1797bp) protein (599aa)
methyl-accepting chemotaxis protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003699C1E
Chemotaxis protein {ECO:0000313|EMBL:KKB77787.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
methyl-accepting chemotaxis protein
SCN18_25_8_15_R2_B_scaffold_1510_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22996..25317)
DNA (2322bp) protein (774aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0KUA0_RHILT
Uncharacterized protein {ECO:0000313|EMBL:KKB77898.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
methyl-accepting chemotaxis sensory transducer
SCN18_25_8_15_R2_B_scaffold_1510_22
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25413..25622)
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL32147.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Displaying 22 items

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