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SCN18_25_8_15_R2_B_scaffold_1555

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1555_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1066
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE24_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB81272.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1555_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1063..3000)
DNA (1938bp) protein (646aa)
Sarcosine oxidase alpha subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE25_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29349.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
sarcosine oxidase alpha subunit
SCN18_25_8_15_R2_B_scaffold_1555_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2997..4073)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE26_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29348.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1555_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4178..5290
DNA (1113bp) protein (371aa)
Cytochrome c heme lyase subunit CcmH n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE27_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29347.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cytochrome c heme lyase subunit CcmH
SCN18_25_8_15_R2_B_scaffold_1555_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5287..5766
DNA (480bp) protein (160aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE28_PELHB
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cytochrome c-type biogenesis protein CcmE, heme chaperone
SCN18_25_8_15_R2_B_scaffold_1555_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5736..7736
DNA (2001bp) protein (667aa)
Cytochrome c heme lyase subunit CcmF n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE29_PELHB
Cytochrome C biogenesis protein CcmF {ECO:0000313|EMBL:KFL29345.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cytochrome c heme lyase subunit CcmF
SCN18_25_8_15_R2_B_scaffold_1555_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7733..8212
DNA (480bp) protein (160aa)
CytoChrome c-type biogenesis protein CcmH n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CM18_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFL29344.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cytochrome C biogenesis protein
SCN18_25_8_15_R2_B_scaffold_1555_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8255..11134
DNA (2880bp) protein (960aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE35_PELHB
glutamate-ammonia-ligase adenylyltransferase
SCN18_25_8_15_R2_B_scaffold_1555_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11131..11304)
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H833_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE46994.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCN18_25_8_15_R2_B_scaffold_1555_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11307..12947)
DNA (1641bp) protein (547aa)
Signal transduction histidine kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE36_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB81266.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
signal transduction histidine kinase
SCN18_25_8_15_R2_B_scaffold_1555_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13217..15853)
DNA (2637bp) protein (879aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003727C19
Aminopeptidase N {ECO:0000313|EMBL:KFL29343.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
aminopeptidase
SCN18_25_8_15_R2_B_scaffold_1555_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16168..18021
DNA (1854bp) protein (618aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE37_PELHB
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB81264.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1555_13
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18237..20093
DNA (1857bp) protein (619aa)
PREDICTED: iron-sulfur clusters transporter atm1, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C126F8
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL29341.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter transmembrane protein
SCN18_25_8_15_R2_B_scaffold_1555_14
unknown

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20212..20289
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 14 items

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