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SCN18_25_8_15_R2_B_scaffold_1598

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1598_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..718
DNA (717bp) protein (239aa)
Thiamin ABC transporter, transmembrane component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R955_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB76003.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
thiamin ABC transporter, transmembrane component
SCN18_25_8_15_R2_B_scaffold_1598_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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705..1340
DNA (636bp) protein (212aa)
Thiamin ABC transporter, ATPase component / thiamine transport ATP-binding protein thiQ n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R956_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB76004.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
thiamin ABC transporter ATPase component / thiamine transport ATP-binding protein thiQ
SCN18_25_8_15_R2_B_scaffold_1598_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1341..3371)
DNA (2031bp) protein (677aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R957_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB76005.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1598_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3420..4709)
DNA (1290bp) protein (430aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
purA; adenylosuccinate synthase (EC:6.3.4.4)
PREDICTED: adenylosuccinate synthetase 1, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C12FB2
SCN18_25_8_15_R2_B_scaffold_1598_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4883..5830
DNA (948bp) protein (316aa)
Permease of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R959_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29830.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
permease of the drug/metabolite transporter (DMT) superfamily
SCN18_25_8_15_R2_B_scaffold_1598_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5838..6767)
DNA (930bp) protein (310aa)
Putative aldo-keto reductase/oxidoreductase n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M4Y7_RHIL3
Aldo/keto reductase {ECO:0000313|EMBL:KFL29829.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
aldo/keto reductase
SCN18_25_8_15_R2_B_scaffold_1598_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6903..8489)
DNA (1587bp) protein (529aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R960_PELHB
3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KFL29828.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
D-3-phosphoglycerate dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1598_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8580..9761)
DNA (1182bp) protein (394aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Phosphoserine aminotransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R962_PELHB
phosphoserine aminotransferase
SCN18_25_8_15_R2_B_scaffold_1598_9
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10204..10983)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CHG0_METED
Putative AAA ATPase {ECO:0000313|EMBL:GAN49836.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1598_10
Sulfurovum sp. NBC37-1, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(11478..13193)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QC42_SULNB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF73051.1}; TaxID=387093 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. (strain NBC37-1).;"
SCN18_25_8_15_R2_B_scaffold_1598_11
unknown

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comp(13408..14064)
DNA (657bp) protein (219aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1598_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14266..15117
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KEM3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KAJ36590.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1598_13
unknown

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comp(15238..15648)
DNA (411bp) protein (137aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1598_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15863..19861
DNA (3999bp) protein (1333aa)
Putative large exoprotein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I2R4_AZOC5
large exoprotein
Putative large exoprotein {ECO:0000313|EMBL:BAF87919.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
Displaying 14 items

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