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SCN18_25_8_15_R2_B_scaffold_1673

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1673_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..790
DNA (789bp) protein (263aa)
Putative integral membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9X3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL27948.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative integral membrane protein
SCN18_25_8_15_R2_B_scaffold_1673_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1063..2652
DNA (1590bp) protein (530aa)
Oligoendopeptidase F n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9Y8_PELHB
Oligoendopeptidase F {ECO:0000313|EMBL:KFL27947.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
oligoendopeptidase F
SCN18_25_8_15_R2_B_scaffold_1673_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2627..2857
DNA (231bp) protein (77aa)
SCN18_25_8_15_R2_B_scaffold_1673_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2915..4450
DNA (1536bp) protein (512aa)
NAD(P) transhydrogenase subunit alpha {ECO:0000256|PIRNR:PIRNR000203}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000203};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
NAD(P) transhydrogenase subunit alpha n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9Y6_PELHB
NAD(P) transhydrogenase subunit alpha
SCN18_25_8_15_R2_B_scaffold_1673_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4452..4814
DNA (363bp) protein (121aa)
NAD/NADP transhydrogenase alpha subunit (EC:1.6.1.2)
Transmembrane NAD(P) transhydrogenase subunit alpha part 2 n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MKH8_9RHIZ
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:KKB76060.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCN18_25_8_15_R2_B_scaffold_1673_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4818..5204
DNA (387bp) protein (129aa)
Endoribonuclease L-PSP n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XQB0_PARAH
Uncharacterized protein {ECO:0000313|EMBL:KFL29673.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
endoribonuclease L-PSP
SCN18_25_8_15_R2_B_scaffold_1673_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5217..6623
DNA (1407bp) protein (469aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
NAD(P) transhydrogenase subunit beta n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9Y4_PELHB
NAD(P) transhydrogenase subunit beta
SCN18_25_8_15_R2_B_scaffold_1673_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6705..9614)
DNA (2910bp) protein (970aa)
Peptidase M16C associated domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCM7_PELHB
Peptidase M16 {ECO:0000313|EMBL:KFL29675.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
peptidase M16C associated domain protein
SCN18_25_8_15_R2_B_scaffold_1673_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9693..10667)
DNA (975bp) protein (325aa)
Aldo/keto reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REI2_PELHB
Aldo/keto reductase {ECO:0000313|EMBL:KFL29676.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
aldo/keto reductase
SCN18_25_8_15_R2_B_scaffold_1673_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10827..11501)
DNA (675bp) protein (225aa)
Transcriptional regulator n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QW21_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFL29678.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative transcriptional regulator, GntR Family
SCN18_25_8_15_R2_B_scaffold_1673_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11639..12547)
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BBX1_9RHOB
LysR family transcriptional regulator {ECO:0000313|EMBL:KFL29679.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
LysR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1673_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12640..13263
DNA (624bp) protein (208aa)
SAM-dependent methyltransferase n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI000248526E
SAM-dependent methyltransferase {ECO:0000313|EMBL:KFL29680.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
methylase
SCN18_25_8_15_R2_B_scaffold_1673_13
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13354..14865
DNA (1512bp) protein (504aa)
ATP-binding protein n=1 Tax=Ochrobactrum anthropi RepID=UPI000287B677
ATP-binding protein {ECO:0000313|EMBL:KFL29681.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1673_14
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15047..15913)
DNA (867bp) protein (289aa)
Putative aldose epimerase family protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VH48_9RHIZ
Aldose epimerase {ECO:0000313|EMBL:KFL29682.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
aldose epimerase
SCN18_25_8_15_R2_B_scaffold_1673_15
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16101..18545
DNA (2445bp) protein (815aa)
ATP-dependent helicase HrpB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8M9_PELHB
ATP-dependent helicase {ECO:0000313|EMBL:KFL29683.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ATP-dependent helicase HrpB
SCN18_25_8_15_R2_B_scaffold_1673_16
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18588..18947)
DNA (360bp) protein (120aa)
methionine sulfoxide reductase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003042B1E
Methionine sulfoxide reductase B {ECO:0000313|EMBL:KFL29684.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
methionine-R-sulfoxide reductase
Displaying 16 items

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