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SCN18_25_8_15_R2_B_scaffold_1731

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1731_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..631)
DNA (630bp) protein (210aa)
Putative LacI family transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U8F8_9RHIZ
LacI family transcriptional regulator {ECO:0000313|EMBL:KFL31333.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1731_2
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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842..2164
DNA (1323bp) protein (441aa)
Alpha-L-fucosidase n=1 Tax=Rhizobium sp. AP16 RepID=J2DVY4_9RHIZ
Alpha-L-fucosidase {ECO:0000313|EMBL:KFL31334.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
alpha-L-fucosidase
SCN18_25_8_15_R2_B_scaffold_1731_3
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2197..2982
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2WWE8_9RHIZ
DNA polymerase beta subunit {ECO:0000313|EMBL:KFL31335.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_1731_4
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3066..4280
DNA (1215bp) protein (405aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Rhizobium sp. AP16 RepID=J2DBT4_9RHIZ
Sugar ABC transporter {ECO:0000313|EMBL:KFL31336.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
sugar ABC transporter
SCN18_25_8_15_R2_B_scaffold_1731_5
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4346..5281
DNA (936bp) protein (312aa)
Putative substrate-binding protein component of ABC transporter n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U1J1_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL31337.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
sugar ABC transporter
SCN18_25_8_15_R2_B_scaffold_1731_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5271..6119
DNA (849bp) protein (283aa)
ABC-type sugar transport system, permease component n=1 Tax=Rhizobium sp. AP16 RepID=J2LIH1_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KFL31338.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
sugar ABC transporter
SCN18_25_8_15_R2_B_scaffold_1731_7
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6131..7198
DNA (1068bp) protein (356aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Rhizobium sp. AP16 RepID=J2DVY8_9RHIZ
Glycerol-3-phosphate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL31339.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
sugar ABC transporter
SCN18_25_8_15_R2_B_scaffold_1731_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7350..7904
DNA (555bp) protein (185aa)
Conserved protein of DIM6/NTAB family n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HTB3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKC31064.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
flavin reductase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1731_9
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8079..9221
DNA (1143bp) protein (381aa)
Phosphonate metabolism protein PhnM n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKD5_9RHIZ
Phosphonate metabolism protein PhnM {ECO:0000313|EMBL:KFL31347.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phosphonate metabolism protein PhnM
SCN18_25_8_15_R2_B_scaffold_1731_10
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9218..9775
DNA (558bp) protein (186aa)
Ribose 1,5-bisphosphate phosphokinase PhnN {ECO:0000256|HAMAP-Rule:MF_00836}; EC=2.7.4.23 {ECO:0000256|HAMAP-Rule:MF_00836};; Ribose 1,5-bisphosphokinase {ECO:0000256|HAMAP-Rule:MF_00836}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
UPI0003D043CE related cluster n=1 Tax=unknown RepID=UPI0003D043CE
phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN
SCN18_25_8_15_R2_B_scaffold_1731_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9873..10598)
DNA (726bp) protein (242aa)
Phosphonates metabolism transcriptional regulator PhnF n=1 Tax=Rhizobium sp. CF142 RepID=J2L7R2_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:KFL31348.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
GntR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1731_12
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10675..11130
DNA (456bp) protein (152aa)
protein phnG n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037CF4AB
Uncharacterized protein {ECO:0000313|EMBL:KFL31349.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phnG; C-P (carbon-phosphorus) lyase component protein
SCN18_25_8_15_R2_B_scaffold_1731_13
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11130..11726
DNA (597bp) protein (199aa)
Carbon-phosphorus lyase complex subunit n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PK22_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL31350.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phnH; phosphonate C-P lyase system protein PhnH
SCN18_25_8_15_R2_B_scaffold_1731_14
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11728..12810
DNA (1083bp) protein (361aa)
carbon-phosphorus lyase complex subunit PhnI n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI0003720458
Carbon-phosphorus lyase complex subunit PhnI {ECO:0000313|EMBL:KFL31351.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phnI; phosphonate metabolism protein PhnI
SCN18_25_8_15_R2_B_scaffold_1731_15
unknown

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12807..12947
DNA (141bp) protein (47aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1731_16
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12944..13819
DNA (876bp) protein (292aa)
C-P (Carbon-phosphorus) lyase component protein n=2 Tax=Rhizobium etli RepID=Q2KDU7_RHIEC
Carbon-phosphorus lyase {ECO:0000313|EMBL:KFL31352.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phnJ; phosphonate metabolism protein PhnJ
SCN18_25_8_15_R2_B_scaffold_1731_17
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13816..14022
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL31353.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_1731_18
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14015..14791
DNA (777bp) protein (259aa)
phosphonate C-P lyase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DEC7C8
Phosphonate C-P lyase system protein PhnK {ECO:0000313|EMBL:KFL31354.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phnK; Phosphonate C-P lyase system protein PhnK
SCN18_25_8_15_R2_B_scaffold_1731_19
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14794..15495
DNA (702bp) protein (234aa)
phosphonate ABC transporter ATPase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F3F48
Phosphonate ABC transporter ATPase {ECO:0000313|EMBL:KFL31355.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phosphonate C-P lyase system protein PhnL
SCN18_25_8_15_R2_B_scaffold_1731_20
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15492..16103
DNA (612bp) protein (204aa)
Probable acetyltransferase protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DHR5_9RHIZ
Acetyltransferase {ECO:0000313|EMBL:KFL31356.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
acetyltransferase
SCN18_25_8_15_R2_B_scaffold_1731_21
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16475..17302
DNA (828bp) protein (276aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
Phosphonate ABC transporter, ATP-binding protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VUQ0_9RHIZ
phosphonate ABC transporter ATP-binding protein
SCN18_25_8_15_R2_B_scaffold_1731_22
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17356..18264
DNA (909bp) protein (303aa)
phosphonate ABC transporter substrate-binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036FF6B8
Phosphonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL31357.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phnD; phosphonate ABC transporter substrate-binding protein PhnD
Displaying 22 items

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