ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1768

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1768_1
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..864)
DNA (864bp) protein (288aa)
Inner membrane ABC transporter permease protein YejE n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CEC3_9RHOB
Peptide ABC transporter permease {ECO:0000313|EMBL:KKB80282.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
peptide ABC transporter permease protein
SCN18_25_8_15_R2_B_scaffold_1768_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(861..1958)
DNA (1098bp) protein (366aa)
Oligopeptide transport system permease protein OppB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF79_PELHB
Microcin ABC transporter permease {ECO:0000313|EMBL:KFL30452.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
oligopeptide transport system permease OppB
SCN18_25_8_15_R2_B_scaffold_1768_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2149..2382
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6C1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30451.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1768_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2503..3090
DNA (588bp) protein (196aa)
Outer membrane lipoprotein omp19 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6B8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC32112.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
outer membrane lipoprotein omp19
SCN18_25_8_15_R2_B_scaffold_1768_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3250..4383
DNA (1134bp) protein (378aa)
ATPase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6B7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30450.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ATPase
SCN18_25_8_15_R2_B_scaffold_1768_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4523..5485
DNA (963bp) protein (321aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Malate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6B6_PELHB
malate dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1768_7
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5578..6771
DNA (1194bp) protein (398aa)
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6AY65_RHILS
SCN18_25_8_15_R2_B_scaffold_1768_8
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6789..7691
DNA (903bp) protein (301aa)
sucD; succinyl-CoA synthetase, alpha subunit, NAD(P)-binding (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
Succinyl-CoA synthetase, alpha subunit, NAD(P)-binding n=2 Tax=Rhizobium RepID=U4QAM8_9RHIZ
SCN18_25_8_15_R2_B_scaffold_1768_9
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8067..11069
DNA (3003bp) protein (1001aa)
2-oxoglutarate dehydrogenase {ECO:0000313|EMBL:KFL30444.1}; EC=1.2.4.2 {ECO:0000313|EMBL:KFL30444.1};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6B3_PELHB
2-oxoglutarate dehydrogenase E1
SCN18_25_8_15_R2_B_scaffold_1768_10
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11093..12355
DNA (1263bp) protein (421aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6B2_PELHB
dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex
SCN18_25_8_15_R2_B_scaffold_1768_11
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12519..12974
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL30442.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_1768_12
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13033..13515
DNA (483bp) protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL30441.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_1768_13
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13567..13956
DNA (390bp) protein (130aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00034D14C0
Uncharacterized protein {ECO:0000313|EMBL:KKB80272.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
membrane protein
SCN18_25_8_15_R2_B_scaffold_1768_14
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14041..14673
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000381002D
Lysine transporter LysE {ECO:0000313|EMBL:KKB80271.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
lysE; amino acid efflux protein
SCN18_25_8_15_R2_B_scaffold_1768_15
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14696..16105
DNA (1410bp) protein (470aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6B0_PELHB
dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1768_16
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16423..17403
DNA (981bp) protein (327aa)
TRAP dicarboxylate transporter subunit DctP n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRG2_9RHIZ
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KFL30437.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
TRAP dicarboxylate transporter subunit DctP
SCN18_25_8_15_R2_B_scaffold_1768_17
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17461..17988
DNA (528bp) protein (176aa)
TRAP-type C4-dicarboxylate transport system, small permease component n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HRH0_9RHIZ
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KFL30436.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
tripartite AtP-independent periplasmic transporter subunit DctQ
Displaying 17 items

View Taxonomy