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SCN18_25_8_15_R2_B_scaffold_2288

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2288_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..949
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F030D7
Uncharacterized protein {ECO:0000313|EMBL:KKB80912.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
periplasmic binding protein/LacI transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2288_trna_1
unknown

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1000..1073
DNA (74bp)
transferRNA Arg
SCN18_25_8_15_R2_B_scaffold_2288_2
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

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1105..2229
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003780E9C
Iron ABC transporter {ECO:0000313|EMBL:KFL31283.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transport system permease
SCN18_25_8_15_R2_B_scaffold_2288_3
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2226..3233
DNA (1008bp) protein (336aa)
ABC transporter related n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLF1_ROSCS
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_25_8_15_R2_B_scaffold_2288_4
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

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3226..4413
DNA (1188bp) protein (396aa)
Periplasmic binding protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8KZ22_FRASN
Uncharacterized protein {ECO:0000313|EMBL:KFL31284.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
periplasmic binding protein
SCN18_25_8_15_R2_B_scaffold_2288_5
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4866..6758
DNA (1893bp) protein (631aa)
Outer membrane cobalamin receptor protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2V1G5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB78147.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
TonB-dependent receptor
SCN18_25_8_15_R2_B_scaffold_2288_6
Paracoccus sp. 361_CN-SCN_Paracoccus_21x, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6910..7938
DNA (1029bp) protein (343aa)
methionine synthase (EC:2.1.1.13)
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:KFL31285.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Methionine synthase (B12-dependent) id=2578780 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
SCN18_25_8_15_R2_B_scaffold_2288_7
Paracoccus sp. 361_CN-SCN_Paracoccus_21x, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7935..10637
DNA (2703bp) protein (901aa)
metH2; methionine synthase subunit B (EC:2.1.1.13)
Methionine synthase, B subunit-1 n=4 Tax=Rhodobacter capsulatus RepID=D5AS54_RHOCB
Methionine synthase {ECO:0000313|EMBL:KFL31286.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_2288_8
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10618..11157)
DNA (540bp) protein (180aa)
ATP--cobalamin adenosyltransferase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003717578
ATP--cobalamin adenosyltransferase {ECO:0000313|EMBL:KFL31287.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ATP:cob(I)alamin adenosyltransferase
SCN18_25_8_15_R2_B_scaffold_2288_9
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11383..11709
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VE65_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFL31702.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2288_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12040..12741
DNA (702bp) protein (234aa)
HAD-superhydrolase, subIA, variant 1 family protein n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KR88_MICAA
Uncharacterized protein {ECO:0000313|EMBL:KKB81299.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
HAD superfamily hydrolase
SCN18_25_8_15_R2_B_scaffold_2288_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12788..13279)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Kocuria atrinae RepID=UPI00031C250B
Uncharacterized protein {ECO:0000313|EMBL:KKB80940.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
putative transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2288_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13439..13882
DNA (444bp) protein (148aa)
Putative membrane protein hemolysin III-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCM0_PELHB
DNA-binding protein {ECO:0000313|EMBL:KFL31701.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative membrane protein hemolysin III-like protein
Displaying 13 items

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