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SCN18_25_8_15_R2_B_scaffold_2338

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2338_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1096
DNA (1095bp) protein (365aa)
Putative oxidoreductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBL0_PELHB
Aldo/keto reductase {ECO:0000313|EMBL:KFL32898.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative oxidoreductase
SCN18_25_8_15_R2_B_scaffold_2338_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1110..2288
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E5CA3
Uncharacterized protein {ECO:0000313|EMBL:KFL32899.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2338_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2397..4196)
DNA (1800bp) protein (600aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Adenine deaminase n=1 Tax=Rhizobium sp. AP16 RepID=J2CYW9_9RHIZ
ade; adenine deaminase
SCN18_25_8_15_R2_B_scaffold_2338_4
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4200..5585)
DNA (1386bp) protein (462aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Rhizobium sp. AP16 RepID=J2KYX5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL31654.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
dapE1; hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2338_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5730..6470)
DNA (741bp) protein (247aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glucosamine-6-phosphate isomerase n=1 Tax=Oceanicola sp. S124 RepID=UPI000255A993
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2338_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6490..7389)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000363F148
Ribokinase {ECO:0000313|EMBL:KFL29178.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
pfkB carbohydrate kinase family protein
SCN18_25_8_15_R2_B_scaffold_2338_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7386..8453)
DNA (1068bp) protein (356aa)
SN-glycerol-3-phosphate transport ATP-binding protein UgpC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R774_PELHB
ABC transporter ATPase {ECO:0000313|EMBL:KFL29177.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SN-glycerol-3-phosphate transport ATP-binding protein UgpC
SCN18_25_8_15_R2_B_scaffold_2338_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8453..9961)
DNA (1509bp) protein (503aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
argininosuccinate lyase n=1 Tax=Meganema perideroedes RepID=UPI00037A69D0
Argininosuccinate lyase
SCN18_25_8_15_R2_B_scaffold_2338_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9965..10819)
DNA (855bp) protein (285aa)
N-acetyl-D-glucosamine ABC transport system, permease protein 2 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R776_PELHB
Sugar ABC transporter permease {ECO:0000313|EMBL:KFL29175.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
N-acetyl-D-glucosamine ABC transport system, permease protein 2
SCN18_25_8_15_R2_B_scaffold_2338_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10816..11748)
DNA (933bp) protein (311aa)
ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000301191A
ABC transporter permease {ECO:0000313|EMBL:KKB79280.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
binding-protein-dependent transport system inner membrane protein
SCN18_25_8_15_R2_B_scaffold_2338_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11891..13126)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00037C4BD3
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB79281.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
sugar ABC transporter substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_2338_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13321..13515
DNA (195bp) protein (65aa)
Transcriptional regulator, ROK family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R779_PELHB
ROK family transcriptional regulator {ECO:0000313|EMBL:KKB79282.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
ROK family transcriptional regulator
Displaying 12 items

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