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SCN18_25_8_15_R2_B_scaffold_2395

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2395_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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32..193
DNA (162bp) protein (54aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL31915.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_2395_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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312..707
DNA (396bp) protein (132aa)
signal peptide protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037CA6C3
Signal peptide protein {ECO:0000313|EMBL:KKB80119.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
putative signal peptide protein
SCN18_25_8_15_R2_B_scaffold_2395_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(765..1256)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D0E48
Uncharacterized protein {ECO:0000313|EMBL:KFL31916.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_2395_4
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1256..3367)
DNA (2112bp) protein (704aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003091E8C
Uncharacterized protein {ECO:0000313|EMBL:KKB84375.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
extracellular repeat-containing protein, HAF family
SCN18_25_8_15_R2_B_scaffold_2395_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3495..4460)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003651E4B
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHS53816.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
AraC family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2395_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4657..5319
DNA (663bp) protein (221aa)
SH3 type 3 domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6H9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP50167.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
SH3 type 3 domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2395_7
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5397..5696)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XSV2_RHIRD
Photosystem reaction center subunit H {ECO:0000313|EMBL:KFL31918.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2395_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5856..6194
DNA (339bp) protein (113aa)
Transcriptional regulator, PadR-like family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYV9_HYPDA
PadR family transcriptional regulator {ECO:0000313|EMBL:KFL31919.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
PadR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2395_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6187..6834
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035D9391
Uncharacterized protein {ECO:0000313|EMBL:KKB84034.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2395_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6831..7712
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYV7_HYPDA
Uncharacterized protein {ECO:0000313|EMBL:KFL31920.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2395_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7837..10443
DNA (2607bp) protein (869aa)
UvrABC system protein B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R666_PELHB
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
excinuclease ABC subunit B
SCN18_25_8_15_R2_B_scaffold_2395_12
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11033..12091)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZF40_ROSLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI93471.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC; 15278 / OCh 149).;"
SCN18_25_8_15_R2_B_scaffold_2395_13
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12251..12607)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E940FA
Uncharacterized protein {ECO:0000313|EMBL:KKB86612.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2395_14
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12805..13155)
DNA (351bp) protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL31923.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Displaying 14 items

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