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SCN18_25_8_15_R2_B_scaffold_2652

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2652_1
unknown

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comp(159..254)
DNA (96bp) protein (32aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2652_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(235..723)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F93828
Uncharacterized protein {ECO:0000313|EMBL:KKB83601.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
GCN5-related N-acetyltransferase
SCN18_25_8_15_R2_B_scaffold_2652_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(723..1343)
DNA (621bp) protein (207aa)
Putative amino acid efflux protein, LysE family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9R1_PELHB
Transporter {ECO:0000313|EMBL:KFL30778.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative amino acid efflux protein, LysE family
SCN18_25_8_15_R2_B_scaffold_2652_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1419..4175)
DNA (2757bp) protein (919aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
DNA gyrase subunit A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9R2_PELHB
DNA gyrase subunit A
SCN18_25_8_15_R2_B_scaffold_2652_5
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4271..5449)
DNA (1179bp) protein (393aa)
Lysophospholipase {ECO:0000313|EMBL:AJR17985.1}; EC=3.1.1.5 {ECO:0000313|EMBL:AJR17985.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003698024
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2652_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5562..5909
DNA (348bp) protein (116aa)
ArsR family transcriptional regulator n=1 Tax=Sciscionella marina RepID=UPI0003810A8D
ArsR family transcriptional regulator {ECO:0000313|EMBL:KFL30781.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transcriptional repressor sdpR
SCN18_25_8_15_R2_B_scaffold_2652_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5906..6394
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI0002EE39AD
Bet v1-like protein {ECO:0000313|EMBL:EJD36531.1}; TaxID=717982 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Auriculariales; Auriculariaceae; Auricularia.;" source="Auricularia delicata (strain TFB10046) (White-rot fungus).;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2652_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6544..6948)
DNA (405bp) protein (135aa)
Transcriptional regulator, HxlR family n=1 Tax=Burkholderia graminis C4D1M RepID=B1FVW9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFL30782.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
MarR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2652_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7102..7983
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003750C17
Uncharacterized protein {ECO:0000313|EMBL:KFL30783.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
NmrA family protein
SCN18_25_8_15_R2_B_scaffold_2652_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8197..10596
DNA (2400bp) protein (800aa)
Putative integral membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9R9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30784.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative integral membrane protein
SCN18_25_8_15_R2_B_scaffold_2652_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10724..11251
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9S0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30785.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2652_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11309..11737)
DNA (429bp) protein (143aa)
Transcriptional regulator, MerR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDK5_PELHB
MerR family transcriptional regulator {ECO:0000313|EMBL:KFL30787.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transcriptional regulator, MerR family
Displaying 12 items

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