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SCN18_25_8_15_R2_B_scaffold_2855

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2855_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..221
DNA (219bp) protein (73aa)
PTS system permease (IIAMan), nitrogen regulatory IIA protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9G0_PELHB
PTS fructose transporter subunit IIA {ECO:0000313|EMBL:KFL32099.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
PTS system permease (IIAMan), nitrogen regulatory IIA protein
SCN18_25_8_15_R2_B_scaffold_2855_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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221..514
DNA (294bp) protein (98aa)
Phosphocarrier protein, nitrogen regulation associated n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9F9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL32098.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phosphocarrier protein, nitrogen regulation associated
SCN18_25_8_15_R2_B_scaffold_2855_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(613..936)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I7F7_RHOVT
Uncharacterized protein {ECO:0000313|EMBL:CDP51437.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2855_4
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1097..2020
DNA (924bp) protein (308aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCW7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB77888.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCN18_25_8_15_R2_B_scaffold_2855_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2066..2611
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHN1_ACIET
Membrane protein {ECO:0000313|EMBL:KFL32096.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2855_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2729..3970)
DNA (1242bp) protein (414aa)
peptidase M29 n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003796014
Peptidase M29 {ECO:0000313|EMBL:KFL32095.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
peptidase M29, aminopeptidase II
SCN18_25_8_15_R2_B_scaffold_2855_7
unknown

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3991..4242
DNA (252bp) protein (84aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2855_8
unknown

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comp(4151..4678)
DNA (528bp) protein (176aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2855_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5003..6799
DNA (1797bp) protein (599aa)
ABC transporter permease/ATP-binding protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S362_RHIET
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:KFL32094.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative ABC multidrug transport system, fused ATPase and permease domain
SCN18_25_8_15_R2_B_scaffold_2855_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6842..7396)
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL32093.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_2855_11
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7560..8057)
DNA (498bp) protein (166aa)
Cytochrome b562 n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VL84_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB77742.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
Cytochrome B561
SCN18_25_8_15_R2_B_scaffold_2855_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8546..8830
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB77741.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCN18_25_8_15_R2_B_scaffold_2855_13
unknown

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comp(8870..9481)
DNA (612bp) protein (204aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2855_14
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9488..10681)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa PAK RepID=S0I2C7_PSEAI
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCN18_25_8_15_R2_B_scaffold_2855_15
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10692..10991)
DNA (300bp) protein (100aa)
DNA polymerase I n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBR0_PELHB
DNA polymerase {ECO:0000313|EMBL:KKB77886.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
DNA polymerase I
Displaying 15 items

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