ggKbase home page

SCN18_25_8_15_R2_B_scaffold_2032_11

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(10538..10876)

Top 3 Functional Annotations

Value Algorithm Source
cupin n=1 Tax=Rhizobium leguminosarum RepID=UPI000364F7E3 similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 111.0
  • Bit_score: 127
  • Evalue 5.90e-27
Cupin {ECO:0000313|EMBL:KFL32866.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 112.0
  • Bit_score: 226
  • Evalue 1.30e-56
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 109.0
  • Bit_score: 127
  • Evalue 1.70e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Microbacterium_69_10 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGACCTATGTTTTGCGCGCGGCCGATCGGCCGGTTTCCCCCAGCCGCACCATCCGCTTCGAGGGCGGCGGCTATGGCACGCCGATTTCGTTCTTTTCGGTCGACAACGAGCCGGGGCAGGGTCCGGCTTTGCATATCCACCCCTATCCCGAGACCTGGATCGTCAAGCGCGGCCGGGCGCTGGTCGTGGCGGGCGATGAAACGTTCGAGCTGGGCATGGGCGATATCGCCATCGCACCGGCCAACGTGCCGCACAAGTTCACCAATATGGGGCCGGACCGGCTGGAGATCGTCTGCATACACGCCGCCGGAACGATGGTGCAGGAGGATCTCGAATGA
PROTEIN sequence
Length: 113
MTYVLRAADRPVSPSRTIRFEGGGYGTPISFFSVDNEPGQGPALHIHPYPETWIVKRGRALVVAGDETFELGMGDIAIAPANVPHKFTNMGPDRLEIVCIHAAGTMVQEDLE*