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SCN18_25_8_15_R2_B_scaffold_2032

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2032_1
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(18..1151)
DNA (1134bp) protein (378aa)
Acyl-CoA dehydrogenase n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2ZU08_9PSEU
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EME63844.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
acyl-CoA dehydrogenase
SCN18_25_8_15_R2_B_scaffold_2032_2
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1171..2022)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00035DCDB3
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAB32462.1}; TaxID=1108044 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia otitidis NBRC 100426.;"
putative ABC transporter permease protein
SCN18_25_8_15_R2_B_scaffold_2032_3
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2019..2810)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037649D7
ABC transporter permease {ECO:0000313|EMBL:KFI79211.1}; TaxID=1437603 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium mongoliense DSM 21395.;"
ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_2032_4
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(2810..3625)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00035C76C4
Nitrate ABC transporter ATPase {ECO:0000313|EMBL:KHL10673.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
nitrate ABC transporter ATPase
SCN18_25_8_15_R2_B_scaffold_2032_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(3646..4665)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036B49C2
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32022.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
putative ABC transporter substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_2032_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5131..5949)
DNA (819bp) protein (273aa)
Protein containing transglutaminase-like domain, putative cysteine protease n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA97_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB75939.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
protein containing transglutaminase-like domain cysteine protease
SCN18_25_8_15_R2_B_scaffold_2032_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5961..6911)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA98_PELHB
A alpha-helical domain with a conserved ER moti {ECO:0000313|EMBL:KFL32863.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2032_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6914..8335)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA99_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL32864.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2032_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8561..9490
DNA (930bp) protein (310aa)
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Rhizobium sp. CF080 RepID=J3AT82_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL32865.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
SCN18_25_8_15_R2_B_scaffold_2032_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9657..10541)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036F4941
Alpha/beta hydrolase {ECO:0000313|EMBL:KKB11665.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
lipolytic protein
SCN18_25_8_15_R2_B_scaffold_2032_11
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(10538..10876)
DNA (339bp) protein (113aa)
cupin n=1 Tax=Rhizobium leguminosarum RepID=UPI000364F7E3
Cupin {ECO:0000313|EMBL:KFL32866.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2032_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10932..11393)
DNA (462bp) protein (154aa)
Putative acetyltransferase n=1 Tax=Halomonas sp. TD01 RepID=F7SKZ8_9GAMM
Putative acetyltransferase {ECO:0000313|EMBL:EGP20606.1}; TaxID=999141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. TD01.;"
putative N-acetyltransferase
SCN18_25_8_15_R2_B_scaffold_2032_13
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11510..13144
DNA (1635bp) protein (545aa)
Maltodextrin glucosidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAA4_PELHB
Alpha-glucosidase {ECO:0000313|EMBL:KKB75943.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
maltodextrin glucosidase
SCN18_25_8_15_R2_B_scaffold_2032_14
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13270..15480)
DNA (2211bp) protein (737aa)
Heavy metal translocating P-type ATPase n=1 Tax=Nitratireductor indicus C115 RepID=K2MXA0_9RHIZ
ATPase {ECO:0000313|EMBL:KFL32867.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
heavy metal translocating P-type ATPase
SCN18_25_8_15_R2_B_scaffold_2032_15
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15548..15628
DNA (81bp) protein (27aa)
MerR family transcriptional regulator {ECO:0000313|EMBL:KFL32868.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Displaying 15 items

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