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SCN18_25_8_15_R2_B_scaffold_157

Search features with annotation key words

Displaying items 1-30 of 177 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_157_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129..1547
DNA (1419bp) protein (473aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
isopropylmalate isomerase (EC:4.2.1.33)
isopropylmalate isomerase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036D06F4
SCN18_25_8_15_R2_B_scaffold_157_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1571..1816
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZF8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC73993.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_157_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1816..2262
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031BDF44
Uncharacterized protein {ECO:0000313|EMBL:KFC73994.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_157_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2290..2892
DNA (603bp) protein (201aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZG0_9RHIZ
SCN18_25_8_15_R2_B_scaffold_157_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3020..4273)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWR2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC73997.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_157_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4276..5760)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TIV8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC73998.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_157_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5861..6259)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00030E72E1
Uncharacterized protein {ECO:0000313|EMBL:KDD68930.1}; TaxID=1419583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mandelii PD30.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_157_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6284..7375)
DNA (1092bp) protein (364aa)
PIF1 helicase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YU99_9RHIZ
RecD-like DNA helicase {ECO:0000313|EMBL:KFC74002.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_157_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7459..9165)
DNA (1707bp) protein (569aa)
methyl-accepting chemotaxis protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI0003464913
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:KFC74003.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
methyl-accepting chemotaxis sensory transducer
SCN18_25_8_15_R2_B_scaffold_157_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9319..10311
DNA (993bp) protein (331aa)
Lipase/esterase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SHH8_9SPHN
Esterase {ECO:0000313|EMBL:EWS99701.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
lipase/esterase
SCN18_25_8_15_R2_B_scaffold_157_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10331..11185
DNA (855bp) protein (285aa)
Putative Prolyl aminopeptidase {ECO:0000313|EMBL:KFC74005.1}; EC=3.4.11.5 {ECO:0000313|EMBL:KFC74005.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
prolyl aminopeptidase (EC:3.4.11.5)
Putative Prolyl aminopeptidase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EMR8_BRASB
SCN18_25_8_15_R2_B_scaffold_157_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11203..11787)
DNA (585bp) protein (195aa)
UPI0003D014C6 related cluster n=1 Tax=unknown RepID=UPI0003D014C6
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KFC74006.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative acetyltransferase
SCN18_25_8_15_R2_B_scaffold_157_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11879..12496
DNA (618bp) protein (206aa)
transporter n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E0F3EA
Putative amino acid efflux protein, LysE family {ECO:0000313|EMBL:KFC74007.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_157_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12509..13204)
DNA (696bp) protein (232aa)
Short-chain dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JIN4_9PROT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KFC74008.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
short-chain dehydrogenase
SCN18_25_8_15_R2_B_scaffold_157_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13321..16920)
DNA (3600bp) protein (1200aa)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:KFC74010.1}; EC=3.5.2.9 {ECO:0000313|EMBL:KFC74010.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
UPI0003CFFC2E related cluster n=1 Tax=unknown RepID=UPI0003CFFC2E
5-oxoprolinase
SCN18_25_8_15_R2_B_scaffold_157_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17142..17690
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IH38_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF86167.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_25_8_15_R2_B_scaffold_157_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17693..18997
DNA (1305bp) protein (435aa)
TRAP C4-dicarboxylate transport system permease n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G7T0_9BRAD
TRAP C4-dicarboxylate transport system permease
TRAP C4-dicarboxylate transport system permease {ECO:0000313|EMBL:BAL76817.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_25_8_15_R2_B_scaffold_157_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19036..20025
DNA (990bp) protein (330aa)
TRAP dicarboxylate transporter n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G7T1_9BRAD
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:KFC74013.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
TRAP dicarboxylate transporter
SCN18_25_8_15_R2_B_scaffold_157_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20138..20662
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA8154
Transcriptional regulator {ECO:0000313|EMBL:KFC74014.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Putative transcription regulator, contains HTH domain (MarR family)
SCN18_25_8_15_R2_B_scaffold_157_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20663..21217)
DNA (555bp) protein (185aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRA4_OPITP
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:KFC74594.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
activator of Hsp90 ATPase 1 family protein
SCN18_25_8_15_R2_B_scaffold_157_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21325..21636)
DNA (312bp) protein (104aa)
Regulatory protein ArsR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWJ6_PARL1
Putative transcriptional regulator {ECO:0000313|EMBL:KFC74595.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
regulatory protein ArsR
SCN18_25_8_15_R2_B_scaffold_157_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21771..22673
DNA (903bp) protein (301aa)
Permease n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJL0_9RHIZ
DMT superfamily permease {ECO:0000313|EMBL:KFC74596.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Uncharacterized transporter HP_1234
SCN18_25_8_15_R2_B_scaffold_157_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22490..22888)
DNA (399bp) protein (133aa)
SCN18_25_8_15_R2_B_scaffold_157_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22918..23376
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00035C8D9F
Fatty-acyl-CoA synthase {ECO:0000313|EMBL:KFC74598.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_157_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23391..24056
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F171DB
Ribonuclease {ECO:0000313|EMBL:KFC74599.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ribonuclease T2
SCN18_25_8_15_R2_B_scaffold_157_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24118..24969
DNA (852bp) protein (284aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7L209_METC4
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_157_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25006..25608
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003187D88
glutathione S-transferase
Glutathione S-transferase family protein {ECO:0000313|EMBL:ADZ69649.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCN18_25_8_15_R2_B_scaffold_157_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25768..26430)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F3675B
Putative outer membrane protein {ECO:0000313|EMBL:KFC74602.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
outer membrane protein, 31 kDa
SCN18_25_8_15_R2_B_scaffold_157_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26805..27620
DNA (816bp) protein (272aa)
Putative Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:KFC74603.1}; EC=2.-.-.- {ECO:0000313|EMBL:KFC74603.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F13DBE
glycosyl transferase family protein
SCN18_25_8_15_R2_B_scaffold_157_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27604..28359
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPE0_9RHIZ
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KFC74604.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
short-chain dehydrogenase/reductase SDR
Displaying items 1-30 of 177 in total

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