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SCN18_25_8_15_R2_B_scaffold_268

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Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_268_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(130..1275)
DNA (1146bp) protein (382aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G007_RHIML
putative alcohol dehydrogenase protein
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:EHK77400.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCN18_25_8_15_R2_B_scaffold_268_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1275..2657)
DNA (1383bp) protein (461aa)
aldehyde dehydrogenase (EC:1.2.1.-)
Probable aldehyde dehydrogenase protein {ECO:0000313|EMBL:ACE91986.1}; EC=1.2.1.- {ECO:0000313|EMBL:ACE91986.1};; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
aldehyde dehydrogenase n=1 Tax=Rhizobium phaseoli RepID=UPI0002ED8444
SCN18_25_8_15_R2_B_scaffold_268_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2704..4071)
DNA (1368bp) protein (456aa)
glutamine synthetase catalytic domain protein (EC:6.3.1.2)
Glutamine synthetase catalytic region n=1 Tax=Rhizobium sp. RepID=L0NFN7_RHISP
Glutamine synthetase {ECO:0000313|EMBL:KEQ05071.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
SCN18_25_8_15_R2_B_scaffold_268_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4535..4849)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVX6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM28118.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_268_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4874..5761)
DNA (888bp) protein (296aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JAZ0_OLICO
Uncharacterized protein {ECO:0000313|EMBL:CDP54089.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_268_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6101..6967
DNA (867bp) protein (289aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z1N2_9RHIZ
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:KFC65008.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter periplasmic protein
SCN18_25_8_15_R2_B_scaffold_268_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6967..8010
DNA (1044bp) protein (348aa)
Quinone oxidoreductase {ECO:0000313|EMBL:KFC65007.1}; EC=1.6.5.5 {ECO:0000313|EMBL:KFC65007.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Putative NAD(P)H quinone oxidoreductase, PIG3 family n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z1N1_9RHIZ
NADPH:quinone oxidoreductase
SCN18_25_8_15_R2_B_scaffold_268_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8051..8884
DNA (834bp) protein (278aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036DD49C
ABC transporter permease protein {ECO:0000313|EMBL:KFC65006.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
polar amino acid ABC transporter inner membrane subunit
SCN18_25_8_15_R2_B_scaffold_268_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8896..9714
DNA (819bp) protein (273aa)
L-cystine import ATP-binding protein (EC:3.6.3.-)
ABC transporter n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031D1920
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:KFC65005.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_8_15_R2_B_scaffold_268_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9733..10575
DNA (843bp) protein (281aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z1M8_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFC65004.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter,periplasmic solute-binding protein
SCN18_25_8_15_R2_B_scaffold_268_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10647..11519
DNA (873bp) protein (291aa)
Putative xylanase/chitin deacetylase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z1N5_9RHIZ
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:KFC65003.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_268_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11677..13107
DNA (1431bp) protein (477aa)
Amidohydrolase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2M8_9PROT
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:KFC65002.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amidohydrolase
SCN18_25_8_15_R2_B_scaffold_268_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13166..14071
DNA (906bp) protein (302aa)
Transcriptional regulatory protein LysR family n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G0Q3_9BRAD
Putative Transcriptional regulatory protein, LysR family {ECO:0000313|EMBL:KFC65001.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcriptional regulatory protein LysR family
SCN18_25_8_15_R2_B_scaffold_268_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14268..15569
DNA (1302bp) protein (434aa)
allantoate amidohydrolase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000363208E
Hydantoinase/carbamoylase family amidase {ECO:0000313|EMBL:KFC64999.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Amidase, hydantoinase/carbamoylase family protein
SCN18_25_8_15_R2_B_scaffold_268_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15624..16283
DNA (660bp) protein (220aa)
Putative hydantoin racemase HyuA n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZD97_9BRAD
Putative hydantoin racemase HyuA {ECO:0000313|EMBL:KFC64998.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative hydantoin racemase HyuA
SCN18_25_8_15_R2_B_scaffold_268_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16299..17780
DNA (1482bp) protein (494aa)
D-hydantoinase DHPase {ECO:0000313|EMBL:KFC64997.1}; EC=3.5.2.2 {ECO:0000313|EMBL:KFC64997.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
D-hydantoinase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZD20_9BRAD
D-hydantoinase
SCN18_25_8_15_R2_B_scaffold_268_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17963..19174
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002EA2994
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:KFC65010.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptidase M24
SCN18_25_8_15_R2_B_scaffold_268_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19277..19795
DNA (519bp) protein (173aa)
SCN18_25_8_15_R2_B_scaffold_268_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19833..20099)
DNA (267bp) protein (89aa)
Cell division topological specificity factor MinE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRX8_9RHIZ
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
minE; cell division topological specificity factor MinE
SCN18_25_8_15_R2_B_scaffold_268_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20096..20911)
DNA (816bp) protein (272aa)
Septum site-determining protein MinD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EPE4_9RHIZ
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
minD; Septum site-determining protein MinD
SCN18_25_8_15_R2_B_scaffold_268_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20945..21670)
DNA (726bp) protein (242aa)
Probable septum site-determining protein MinC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C6Q7_9RHIZ
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
minC; septum formation inhibitor
SCN18_25_8_15_R2_B_scaffold_268_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21957..22958)
DNA (1002bp) protein (334aa)
Pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family {ECO:0000313|EMBL:KFC70971.1}; EC=3.5.99.7 {ECO:0000313|EMBL:KFC70971.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
D-cysteine desulfhydrase (EC:3.5.99.7)
Putative 1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0C2_9PROT
SCN18_25_8_15_R2_B_scaffold_268_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23069..23950)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000361CB1A
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:KFC70972.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
binding-protein-dependent transport systems inner membrane component
SCN18_25_8_15_R2_B_scaffold_268_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23964..24905)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036FB026
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:KFC70973.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
SCN18_25_8_15_R2_B_scaffold_268_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25086..26726)
DNA (1641bp) protein (547aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00038247F6
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFC70974.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dipeptide/oligopeptide ABC transporter substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_268_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26791..28260)
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003709D4C
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_268_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28446..29228)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000375AB5E
Transcriptional regulator, IclR family {ECO:0000313|EMBL:KFC75704.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
IclR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_268_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29368..30030
DNA (663bp) protein (221aa)
Amino acid ABC transporter, permease component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHL5_AZOL4
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:KFC75705.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amino acid ABC transporter permease protein
SCN18_25_8_15_R2_B_scaffold_268_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30027..30677
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036B6A8A
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:KFC75706.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amino acid ABC transporter permease protein
SCN18_25_8_15_R2_B_scaffold_268_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30664..31395
DNA (732bp) protein (244aa)
amino acid ABC transporter ATP-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FE2BCE
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:KFC75707.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amino acid ABC transporter ATP-binding protein
Displaying items 1-30 of 116 in total

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