ggKbase home page

SCN18_25_8_15_R2_B_scaffold_310

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_310_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..956)
DNA (954bp) protein (318aa)
GCN5-related N-acetyltransferase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ILP1_METNO
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KFC63648.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
N-acetyltransferase GCN5
SCN18_25_8_15_R2_B_scaffold_310_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(953..1279)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000374F5B5
Uncharacterized protein {ECO:0000313|EMBL:KFC63649.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_8_15_R2_B_scaffold_310_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1276..2115)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UKF3_METS4
Uncharacterized protein {ECO:0000313|EMBL:KFC63650.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_310_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2448..4280)
DNA (1833bp) protein (611aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8B3_VARPE
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:KFC63655.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_8_15_R2_B_scaffold_310_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4536..5720
DNA (1185bp) protein (395aa)
aspartate aminotransferase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000312BA75
Aspartate aminotransferase B {ECO:0000313|EMBL:KFC63656.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Aminotransferase class I/II
SCN18_25_8_15_R2_B_scaffold_310_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5872..6681)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036427A0
Uncharacterized protein {ECO:0000313|EMBL:KFC73238.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_310_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6970..7257
DNA (288bp) protein (96aa)
50S ribosomal protein L28 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DF2703
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rpmB; 50S ribosomal protein L28
SCN18_25_8_15_R2_B_scaffold_310_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7435..8433)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FAB92B
Uncharacterized protein {ECO:0000313|EMBL:KFC73240.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_310_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8433..10325)
DNA (1893bp) protein (631aa)
Cobaltochelatase CobT subunit {ECO:0000313|EMBL:KFC73241.1}; EC=6.6.1.2 {ECO:0000313|EMBL:KFC73241.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cobalt chelatase large subunit (EC:6.6.1.2)
Cobaltochelatase, CobT subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMH3_9RHIZ
SCN18_25_8_15_R2_B_scaffold_310_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10354..10704)
DNA (351bp) protein (117aa)
Glutathione-dependent formaldehyde-activating, GFA n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11DT3_MESSB
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:KFC73243.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glutathione-dependent formaldehyde-activating protein
SCN18_25_8_15_R2_B_scaffold_310_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10721..11707)
DNA (987bp) protein (329aa)
cobalt chelatase small subunit (EC:6.6.1.2)
Cobaltochelatase, CobS subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMH4_9RHIZ
Cobalt insertion protein {ECO:0000313|EMBL:KFC73244.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_8_15_R2_B_scaffold_310_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11857..13017)
DNA (1161bp) protein (387aa)
Glycosyltransferase 28 domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IKH9_METNO
Glycosyltransferase 28 domain protein {ECO:0000313|EMBL:KFC73245.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Glycosyltransferase 28 domain-containing protein
SCN18_25_8_15_R2_B_scaffold_310_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13014..14264)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000381A5E9
Glycosyl transferase group 1 {ECO:0000313|EMBL:KFC73246.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
group 1 glycosyl transferase
SCN18_25_8_15_R2_B_scaffold_310_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14261..14923)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DAU7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC73247.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_310_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15000..16808)
DNA (1809bp) protein (603aa)
Ferredoxin {ECO:0000313|EMBL:KFC73249.1}; EC=4.6.1.1 {ECO:0000313|EMBL:KFC73249.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F9B04D
adenylate cyclase
SCN18_25_8_15_R2_B_scaffold_310_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16825..17274)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7C9V3_METED
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:KFC73250.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_310_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17271..20159)
DNA (2889bp) protein (963aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F69FA2
ABC-type bacteriocin/lantibiotic exporter {ECO:0000313|EMBL:KFC73251.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter
SCN18_25_8_15_R2_B_scaffold_310_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20328..22235
DNA (1908bp) protein (636aa)
gsiA1; glutathione import ATP-binding protein GsiA (EC:3.6.3.-)
ATP-binding component of a ABC transport system (Oligopeptide) n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4I4_9RHIZ
Putative peptide transporter {ECO:0000313|EMBL:KFC73253.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_8_15_R2_B_scaffold_310_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22232..24199
DNA (1968bp) protein (656aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VJI5_9RHIZ
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:KFC73254.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
oligopeptide ABC transporter substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_310_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24203..25204
DNA (1002bp) protein (334aa)
Oligopeptide ABC transporter, permease protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98GL8_RHILO
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:KFC73255.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
oligopeptide ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_310_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25201..26388
DNA (1188bp) protein (396aa)
Probable oligopeptide ABC transporter, permease protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DAS2_9RHIZ
Putative peptide transporter permease subunit: membrane component of ABC superfamily protein {ECO:0000313|EMBL:KFC73256.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative transmembrane permease component of ABC transporter
SCN18_25_8_15_R2_B_scaffold_310_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26415..27554
DNA (1140bp) protein (380aa)
UPI0003CE792F related cluster n=1 Tax=unknown RepID=UPI0003CE792F
Glycosyl transferase group 1 {ECO:0000313|EMBL:KFC73257.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_310_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27551..28348
DNA (798bp) protein (266aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K047_RHIEC
Putative glycosyl transferase {ECO:0000313|EMBL:KFC73258.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_310_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28498..29778
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DB062B
Glycosyltransferase 28 domain protein {ECO:0000313|EMBL:KFC73259.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative glycosyltransferase
SCN18_25_8_15_R2_B_scaffold_310_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29851..30039
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00035E0DE0
Uncharacterized protein {ECO:0000313|EMBL:KFC73265.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypoxia induced protein region
SCN18_25_8_15_R2_B_scaffold_310_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30195..30791
DNA (597bp) protein (199aa)
Lipid A 3-O-deacylase (PagL) n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPU2_9RHIZ
Lipid A 3-O-deacylase (PagL) {ECO:0000313|EMBL:KFC73266.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_310_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30850..31431
DNA (582bp) protein (194aa)
ATP--cobalamin adenosyltransferase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WXM4_OCHA4
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:KFC73267.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ATP--cobalamin adenosyltransferase
SCN18_25_8_15_R2_B_scaffold_310_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31440..32138
DNA (699bp) protein (233aa)
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTF7_9RHIZ
Rhomboid family protein {ECO:0000313|EMBL:KFC73268.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
membrane protein
SCN18_25_8_15_R2_B_scaffold_310_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32302..33048
DNA (747bp) protein (249aa)
Electron transfer flavoprotein beta subunit-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IZD2_POLGS
Electron transfer flavoprotein small subunit {ECO:0000313|EMBL:KFC73269.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
electron transfer flavoprotein beta subunit-like protein
SCN18_25_8_15_R2_B_scaffold_310_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33048..33992
DNA (945bp) protein (315aa)
electron transfer flavoprotein subunit beta n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000314F15B
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:KFC73270.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
electron transfer flavoprotein large subunit
Displaying items 1-30 of 107 in total

View Taxonomy