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SCN18_25_8_15_R2_B_scaffold_482

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Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_482_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..576)
DNA (576bp) protein (192aa)
Putative acid-thiol ligase {ECO:0000313|EMBL:KFC75144.1}; EC=6.2.1.- {ECO:0000313|EMBL:KFC75144.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
AMP-dependent synthetase and ligase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IKJ9_METNO
AMP-dependent synthetase and ligase
SCN18_25_8_15_R2_B_scaffold_482_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(542..1786)
DNA (1245bp) protein (415aa)
Butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW34_9RHIZ
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KFC75145.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_8_15_R2_B_scaffold_482_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1788..2624)
DNA (837bp) protein (279aa)
Putative Enoyl-CoA hydratase {ECO:0000313|EMBL:KFC75146.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KFC75146.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW33_9RHIZ
SCN18_25_8_15_R2_B_scaffold_482_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2624..3160)
DNA (537bp) protein (179aa)
transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036F4C1F
Putative transcriptional regulatory protein, MarR family {ECO:0000313|EMBL:KFC75147.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative transcriptional regulatory protein, MarR family
SCN18_25_8_15_R2_B_scaffold_482_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3162..3917)
DNA (756bp) protein (252aa)
Short-chain alcohol dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QQQ0_9BRAD
Putative oxidoreductase {ECO:0000313|EMBL:KFC75148.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative oxidoreductase
SCN18_25_8_15_R2_B_scaffold_482_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4156..6480
DNA (2325bp) protein (775aa)
NADPH dehydrogenase {ECO:0000313|EMBL:KFC75149.1}; EC=1.6.99.1 {ECO:0000313|EMBL:KFC75149.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
FAD binding domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRD9_9PROT
NADPH dehydrogenase
SCN18_25_8_15_R2_B_scaffold_482_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6493..7839)
DNA (1347bp) protein (449aa)
Major facilitator superfamily transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2K599_9PROT
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:KFC75679.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_482_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8217..9299
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKU4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC72790.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_482_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9352..9600)
DNA (249bp) protein (83aa)
SCN18_25_8_15_R2_B_scaffold_482_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9629..12310)
DNA (2682bp) protein (894aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DNA topoisomerase I n=1 Tax=Methylobacterium sp. MB200 RepID=UPI0003459763
DNA topoisomerase I
SCN18_25_8_15_R2_B_scaffold_482_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12307..12609)
DNA (303bp) protein (101aa)
SCN18_25_8_15_R2_B_scaffold_482_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12674..13879)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00035E98D5
Beta-lactamase {ECO:0000313|EMBL:CEJ12431.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Beta-lactamase
SCN18_25_8_15_R2_B_scaffold_482_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13939..14883
DNA (945bp) protein (315aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
aspartate carbamoyltransferase n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003653D65
pyrB; aspartate carbamoyltransferase catalytic subunit
SCN18_25_8_15_R2_B_scaffold_482_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14901..16217
DNA (1317bp) protein (439aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dihydroorotase, multifunctional complex type (EC:3.5.2.3)
dihydroorotase n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036BAB36
SCN18_25_8_15_R2_B_scaffold_482_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16352..16975
DNA (624bp) protein (208aa)
glycerol-3-phosphate acyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002F2DD77
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glycerol-3-phosphate acyltransferase PlsY
SCN18_25_8_15_R2_B_scaffold_482_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16983..18203
DNA (1221bp) protein (407aa)
DNA protecting protein DprA n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z008_9RHIZ
DNA protecting protein DprA {ECO:0000313|EMBL:KFC72795.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DNA protecting protein DprA
SCN18_25_8_15_R2_B_scaffold_482_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18219..18461)
DNA (243bp) protein (81aa)
SCN18_25_8_15_R2_B_scaffold_482_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18571..19485)
DNA (915bp) protein (305aa)
Transporter, AEC family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IVZ6_POLGS
Auxin Efflux Carrier {ECO:0000313|EMBL:KFC72797.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
AEC family transporter
SCN18_25_8_15_R2_B_scaffold_482_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19736..20116
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC69217.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_8_15_R2_B_scaffold_482_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20220..20594
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC72799.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_8_15_R2_B_scaffold_482_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20652..21158)
DNA (507bp) protein (169aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Putative Holliday junction resolvase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWX3_9RHIZ
endonuclease
SCN18_25_8_15_R2_B_scaffold_482_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21319..21900
DNA (582bp) protein (194aa)
UPI0003CE6C2F related cluster n=1 Tax=unknown RepID=UPI0003CE6C2F
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:CEJ09826.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative acetyltransferase
SCN18_25_8_15_R2_B_scaffold_482_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21897..22829
DNA (933bp) protein (311aa)
D-3-phosphoglycerate dehydrogenase SerA {ECO:0000313|EMBL:KFC72806.1}; EC=1.1.1.95 {ECO:0000313|EMBL:KFC72806.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
serA1; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Nitratireductor indicus C115 RepID=K2NQ82_9RHIZ
SCN18_25_8_15_R2_B_scaffold_482_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22899..24599)
DNA (1701bp) protein (567aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Adenine deaminase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TX18_9PROT
ade; adenine deaminase
SCN18_25_8_15_R2_B_scaffold_482_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24730..25014
DNA (285bp) protein (95aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQZ6_PARL1
excinuclease ABC subunit C
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:ABS62329.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_25_8_15_R2_B_scaffold_482_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25039..25737
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030DFF74
UPF0173 metal-dependent hydrolase FG93_06202 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
beta-lactamase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_482_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25850..26137
DNA (288bp) protein (96aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=GATC_RHOP2
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C
SCN18_25_8_15_R2_B_scaffold_482_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26221..27735
DNA (1515bp) protein (505aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWY0_9RHIZ
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
SCN18_25_8_15_R2_B_scaffold_482_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27866..28072
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC61613.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_8_15_R2_B_scaffold_482_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28266..31454)
DNA (3189bp) protein (1063aa)
transporter n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036E7E96
Hydrophobe/amphiphile efflux-1 HAE1 {ECO:0000313|EMBL:KFC61614.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Displaying items 1-30 of 70 in total

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