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SCN18_25_8_15_R2_B_scaffold_484

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_484_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

794..3532
DNA (2739bp) protein (913aa)
Nitrite extrusion protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBW1_OLICO
narK; nitrite extrusion protein NarK
Nitrite extrusion protein NarK {ECO:0000313|EMBL:AEI07608.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_25_8_15_R2_B_scaffold_484_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3690..7445
DNA (3756bp) protein (1252aa)
Respiratory nitrate reductase alpha chain (EC:1.7.99.4)
Nitrate reductase, alpha subunit {ECO:0000313|EMBL:ACB24579.1}; EC=1.7.99.4 {ECO:0000313|EMBL:ACB24579.1};; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
Nitrate reductase, alpha subunit n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M129_METRJ
SCN18_25_8_15_R2_B_scaffold_484_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7458..8981
DNA (1524bp) protein (508aa)
Nitrate reductase, beta subunit n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M128_METRJ
nitrate reductase subunit beta
Nitrate reductase, beta subunit {ECO:0000313|EMBL:ACB24578.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCN18_25_8_15_R2_B_scaffold_484_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9126..9863
DNA (738bp) protein (246aa)
Nitrate reductase molybdenum cofactor assembly chaperone n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IUP3_METNO
nitrate reductase molybdenum cofactor assembly chaperone
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:ACL57111.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_25_8_15_R2_B_scaffold_484_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9876..10616
DNA (741bp) protein (247aa)
respiratory nitrate reductase subunit gamma (EC:1.7.99.4)
Respiratory nitrate reductase, gamma subunit {ECO:0000313|EMBL:ACL57110.1}; EC=1.7.99.4 {ECO:0000313|EMBL:ACL57110.1};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
Respiratory nitrate reductase, gamma subunit n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IUP2_METNO
SCN18_25_8_15_R2_B_scaffold_484_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10663..11496
DNA (834bp) protein (278aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IUP1_METNO
PpiC-type peptidyl-prolyl cis-trans isomerase
SCN18_25_8_15_R2_B_scaffold_484_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11509..11820
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M124_METRJ
protein of unassigned function
Uncharacterized protein {ECO:0000313|EMBL:ACB24574.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCN18_25_8_15_R2_B_scaffold_484_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11798..12367
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J793_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE78971.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_484_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12360..13115
DNA (756bp) protein (252aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
carbonic anhydrase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00035C0BE5
carbonate dehydratase
SCN18_25_8_15_R2_B_scaffold_484_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13164..13700
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000367868A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA19966.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_25_8_15_R2_B_scaffold_484_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13720..14118)
DNA (399bp) protein (133aa)
Response regulator receiver protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IUN5_METNO
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACL57103.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_25_8_15_R2_B_scaffold_484_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14253..14870)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D8B3DA
Response regulator FixJ {ECO:0000313|EMBL:KFG70901.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
fixJ; response regulator FixJ
SCN18_25_8_15_R2_B_scaffold_484_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14860..16371)
DNA (1512bp) protein (504aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3)
PAS domain S-box n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0Q2_9RHIZ
SCN18_25_8_15_R2_B_scaffold_484_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17729..19090)
DNA (1362bp) protein (454aa)
Amidohydrolase family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMC6_9PROT
Atrazine chlorohydrolase {ECO:0000313|EMBL:CEJ13065.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative hydrolase
SCN18_25_8_15_R2_B_scaffold_484_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19167..20585)
DNA (1419bp) protein (473aa)
Metallo-dependent hydrolase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I910_AZOC5
metallo-dependent hydrolase
Metallo-dependent hydrolase {ECO:0000313|EMBL:BAF88728.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_25_8_15_R2_B_scaffold_484_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20676..21452)
DNA (777bp) protein (259aa)
ABC transporter permease n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0AZJ8_ALCFA
Putative aliphatic sulfonates transport permease protein SsuC {ECO:0000313|EMBL:CEJ12031.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_484_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21445..22224)
DNA (780bp) protein (260aa)
Aliphatic sulfonates transporter ATP-binding protein SsuB n=2 Tax=Alcaligenes RepID=M5IY79_9BURK
Bicarbonate transport ATP-binding protein CmpD {ECO:0000313|EMBL:CEJ12030.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
nitrate ABC transporter ATP-binding protein
SCN18_25_8_15_R2_B_scaffold_484_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22758..23645
DNA (888bp) protein (296aa)
LysR family transcriptional regulator n=2 Tax=Alcaligenes RepID=M5IXL3_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:ERI33361.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
LysR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_484_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24122..25117)
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5IUC6_9BURK
Putative thiamine biosynthesis protein {ECO:0000313|EMBL:CEJ12029.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
NMT1/THI5-like domain-containing protein
SCN18_25_8_15_R2_B_scaffold_484_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25947..26360)
DNA (414bp) protein (138aa)
Transcription elongation factor n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0U4_9RHIZ
Transcription elongation factor {ECO:0000313|EMBL:EIM29836.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
GreA/GreB family elongation factor
SCN18_25_8_15_R2_B_scaffold_484_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26991..27314
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Sphingobium chinhatense RepID=UPI000373E015
Uncharacterized protein {ECO:0000313|EMBL:EPR17656.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_484_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27372..27767)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000363D4DF
monovalent cation/H+ antiporter subunit G
Monovalent cation/H+ antiporter subunit G {ECO:0000313|EMBL:AIB14478.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_25_8_15_R2_B_scaffold_484_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27764..28045)
DNA (282bp) protein (94aa)
cation:proton antiporter n=1 Tax=Hoeflea sp. 108 RepID=UPI0003795813
Putative monovalent cation/H+ antiporter subunit F {ECO:0000313|EMBL:EMG52452.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
multiple resistance and pH regulation F family protein
SCN18_25_8_15_R2_B_scaffold_484_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28042..28527)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A8449
Cation:proton antiporter {ECO:0000313|EMBL:ETR77580.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
monovalent cation/H+ antiporter subunit E
SCN18_25_8_15_R2_B_scaffold_484_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28524..30164)
DNA (1641bp) protein (547aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036DF458
cation:proton antiporter
Cation:proton antiporter {ECO:0000313|EMBL:AHB49090.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_25_8_15_R2_B_scaffold_484_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30164..30505)
DNA (342bp) protein (114aa)
cation:proton antiporter n=1 Tax=Hoeflea sp. 108 RepID=UPI0003778D33
Putative monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:EFH12433.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
NADH-ubiquinone oxidoreductase, chain 4L
SCN18_25_8_15_R2_B_scaffold_484_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30496..33399)
DNA (2904bp) protein (968aa)
monovalent cation/H+ antiporter subunit A (EC:1.6.5.3)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000367EDB7
Cation:proton antiporter {ECO:0000313|EMBL:ETR77583.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCN18_25_8_15_R2_B_scaffold_484_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34220..35050)
DNA (831bp) protein (277aa)
Mechanosensitive channel protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSX9_9RHIZ
Mechanosensitive channel protein {ECO:0000313|EMBL:EIM72681.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
putative mechanosensitive channel protein
SCN18_25_8_15_R2_B_scaffold_484_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36727..37314
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XJP0_VARPD
Uncharacterized protein {ECO:0000313|EMBL:CEJ11118.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_484_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37322..37846)
DNA (525bp) protein (175aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FC2BA4
NUDIX hydrolase
Displaying items 1-30 of 62 in total

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