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SCN18_25_8_15_R2_B_scaffold_623

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Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_623_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(362..1405)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037DB631
Multidrug resistance efflux pump {ECO:0000313|EMBL:EIM28338.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
multidrug resistance protein A
SCN18_25_8_15_R2_B_scaffold_623_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1402..3060)
DNA (1659bp) protein (553aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003682ECE
MFS transporter {ECO:0000313|EMBL:KFI27326.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
drug resistance transporter, EmrB/QacA subfamily
SCN18_25_8_15_R2_B_scaffold_623_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3057..3506)
DNA (450bp) protein (150aa)
MarR family transcriptional regulator n=2 Tax=Rhodospirillum rubrum RepID=G2TE22_RHORU
MarR family transcriptional regulator {ECO:0000313|EMBL:KFI27325.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
MarR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_623_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3699..4094)
DNA (396bp) protein (132aa)
50S ribosomal protein L19 n=1 Tax=Methylocystis parvus RepID=UPI0002F473E6
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rplS; 50S ribosomal protein L19
SCN18_25_8_15_R2_B_scaffold_623_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4294..5082
DNA (789bp) protein (263aa)
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:KFC73988.1}; EC=1.1.1.69 {ECO:0000313|EMBL:KFC73988.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IS65_RHOP2
short-chain dehydrogenase
SCN18_25_8_15_R2_B_scaffold_623_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5226..5414)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7Q3_STAND
Uncharacterized protein {ECO:0000313|EMBL:KFC75896.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_623_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5844..7928
DNA (2085bp) protein (695aa)
Translation elongation factor-like GTPase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPM6_9RHIZ
Translation elongation factor 2 (EF-2/EF-G) {ECO:0000313|EMBL:KFC73986.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
elongation factor G
SCN18_25_8_15_R2_B_scaffold_623_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8140..9855
DNA (1716bp) protein (572aa)
Acyl-CoA synthetase {ECO:0000313|EMBL:KFC73985.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KFC73985.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E0BF77
AMP-dependent synthetase and ligase
SCN18_25_8_15_R2_B_scaffold_623_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9954..11060
DNA (1107bp) protein (369aa)
molybdopterin containing oxidoreductase n=1 Tax=Loktanella hongkongensis RepID=UPI0003759BD0
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:KFC73984.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sulfite oxidase and related enzyme
SCN18_25_8_15_R2_B_scaffold_623_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11191..12537)
DNA (1347bp) protein (449aa)
MiaB family protein, possibly involved in tRNA or rRNA modification n=1 Tax=Rhodovulum sp. PH10 RepID=J6L8U5_9RHOB
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:KFC73983.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
MiaB-like tRNA modifying enzyme
SCN18_25_8_15_R2_B_scaffold_623_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12563..13447)
DNA (885bp) protein (295aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=DAPF_METNO
SCN18_25_8_15_R2_B_scaffold_623_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13589..14479
DNA (891bp) protein (297aa)
Putative transcription activator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZ76_9RHIZ
Transcription activator, effector binding {ECO:0000313|EMBL:KFC73981.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcription activator effector binding
SCN18_25_8_15_R2_B_scaffold_623_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14610..15668)
DNA (1059bp) protein (353aa)
membrane protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003643319
Putative Zn-dependent hydrolase of beta-lactamase {ECO:0000313|EMBL:KFC73980.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
beta-lactamase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_623_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15725..16351)
DNA (627bp) protein (209aa)
lysine transporter LysE n=1 Tax=Hoeflea sp. 108 RepID=UPI0003624795
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:KFC73978.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
lysine exporter protein LysE/YggA
SCN18_25_8_15_R2_B_scaffold_623_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16412..16993)
DNA (582bp) protein (194aa)
SCP-like extracellular n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8N3_STAND
SCP-like extracellular protein {ECO:0000313|EMBL:KFC73976.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_623_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17065..17493)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035C1E3F
Uncharacterized protein {ECO:0000313|EMBL:KFC73977.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_623_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17799..19385
DNA (1587bp) protein (529aa)
Ffh, signal recognition particle protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000360CCE0
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
signal recognition particle protein
SCN18_25_8_15_R2_B_scaffold_623_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19382..19897
DNA (516bp) protein (172aa)
Acetyltransferase, GNAT family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LNF7_RUEPO
HAE1 family hydrophobic/amphiphilic exporter-1 (Mainly G-bacteria) {ECO:0000313|EMBL:KFC73974.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acetyltransferase, GNAT family
SCN18_25_8_15_R2_B_scaffold_623_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19928..20296
DNA (369bp) protein (123aa)
30S ribosomal protein S16 n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=RS16_METPB
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rpsP; 30S ribosomal protein S16
SCN18_25_8_15_R2_B_scaffold_623_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20396..20917
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00036D4839
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
16S rRNA processing protein RimM
SCN18_25_8_15_R2_B_scaffold_623_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20904..21575
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI0003800946
Uncharacterized protein {ECO:0000313|EMBL:KFC73971.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hydrolase, HAD-superfamily
SCN18_25_8_15_R2_B_scaffold_623_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21580..22275
DNA (696bp) protein (232aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N1)-methyltransferase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EC3FE1
SCN18_25_8_15_R2_B_scaffold_623_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22266..22688)
DNA (423bp) protein (141aa)
Rhodanese-like protein n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GGE6_RUEST
Molybdopterin biosynthesis protein MoeB {ECO:0000313|EMBL:KFC73969.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rhodanese-like protein
SCN18_25_8_15_R2_B_scaffold_623_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22694..23896)
DNA (1203bp) protein (401aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HSM4_9RHIZ
Aminotransferase class I and II {ECO:0000313|EMBL:KFC73968.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
class I and II aminotransferase
SCN18_25_8_15_R2_B_scaffold_623_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24061..24543
DNA (483bp) protein (161aa)
UPF0178 protein MicloDRAFT_00016220 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYV8_9RHIZ
UPF0178 protein FG93_01653 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_623_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24775..25749
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPM2_9RHIZ
Hemolysin III {ECO:0000313|EMBL:KFC73960.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_623_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25980..26927
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00037D7DF7
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:KFC70934.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_623_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27029..28153
DNA (1125bp) protein (375aa)
Glucose/sorbosone dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPL8_9RHIZ
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:KFC73958.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glucose sorbosone dehydrogenase
SCN18_25_8_15_R2_B_scaffold_623_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28161..28463)
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC73957.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_8_15_R2_B_scaffold_623_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28500..28856)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZT63_RHILW
Uncharacterized protein {ECO:0000313|EMBL:KFC73955.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
Displaying items 1-30 of 65 in total

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