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SCN18_25_8_15_R2_B_scaffold_4001

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_4001_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..2361
DNA (2361bp) protein (787aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E1FE48
DNA-directed RNA polymerase subunit beta'
SCN18_25_8_15_R2_B_scaffold_4001_2
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2706..3878
DNA (1173bp) protein (391aa)
Putative regulatory protein (LuxR-family) n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EM07_BRASB
Putative LuxR-family regulatory protein {ECO:0000313|EMBL:KFC67533.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LuxR family regulatory protein
SCN18_25_8_15_R2_B_scaffold_4001_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4397..4768
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWA2_9RHIZ
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rpsL; 30S ribosomal protein S12
SCN18_25_8_15_R2_B_scaffold_4001_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4842..5312
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWA3_9RHIZ
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
30S ribosomal protein S7
SCN18_25_8_15_R2_B_scaffold_4001_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5346..7421
DNA (2076bp) protein (692aa)
Elongation factor G n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWA4_9RHIZ
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
elongation factor G
SCN18_25_8_15_R2_B_scaffold_4001_6
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7473..7619
DNA (147bp) protein (49aa)
Elongation factor Tu n=2 Tax=Microvirga sp. WSM3557 RepID=I4YWA5_9RHIZ
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
elongation factor Tu
Displaying 6 items

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