ggKbase home page

SCN18_25_8_15_R2_B_scaffold_2010_6

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(5433..6212)

Top 3 Functional Annotations

Value Algorithm Source
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTH4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 251.0
  • Bit_score: 292
  • Evalue 3.20e-76
HpcH/HpaI aldolase {ECO:0000313|EMBL:KFC62938.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 258.0
  • Bit_score: 427
  • Evalue 9.00e-117
HpcH/HpaI aldolase similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 258.0
  • Bit_score: 274
  • Evalue 2.60e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGGCCAAGTCCACTGTCCTGTCTTCCCTCGCCGATCGCTTCGCGAAGGGCGACAGCATCGTTTCAGCCTGGTGCGGCCTGCCCGATCCGTCCGTTTCGGCGACACTCGCGCAGGAGGATTTCGACGCGATCACGCTCGACATGCAGCACGGGCCGATCACGTTGGCTGAGGTCATCCGCGCGATCCCGCTGATCAATGCCGCGGGCAAGCCGGCCATCGCGCGCATTCCGGTCGGCGAATTCCAGAACGTCTCGAAGCTGTTCGACAGCGGCGTCTCAGGCGTCATCGCGCCGATGATCAACACGATGGAGGACGCGCGCCGTTTCGCGGCCTATGCCAAGTATCCGCCGATGGGCGAGCGAAGCTGGGGCAGCTATGGGGGCTTAAGCGCCTCCGGCCTCGACCAGAACGGCTATCTCAAGGCCGCCAACAGCTTCTCGATGACCTTTGCGATGATCGAAACGCGCGAGGCGATGGCAATCGTCGACGACATTCTGGCGCTGGACGGGATCGACGCGCTGTTCGTGGGGCCGTCCGATCTGTCGATCGCACTTTCCGGCGGGGCGAAGGTCGATGCCACCGCGCGCGAGGTCGATGAAGCGCTCAAGCACGTCGTCGCGCGGGCTTCGGCGGCCAATAAGCCGGTCGCGCTCTATGCCGCGACGGCCGAGCGCGCGAAGCAGGGCCTCGCCATGGGCGCGCGCATGGTCACGGTGATGAGCGATACGGGGATGCTGCGCGCTGCTGCGCAGGCGGCGCTGAAGATCACGCGAAGCTGA
PROTEIN sequence
Length: 260
MAKSTVLSSLADRFAKGDSIVSAWCGLPDPSVSATLAQEDFDAITLDMQHGPITLAEVIRAIPLINAAGKPAIARIPVGEFQNVSKLFDSGVSGVIAPMINTMEDARRFAAYAKYPPMGERSWGSYGGLSASGLDQNGYLKAANSFSMTFAMIETREAMAIVDDILALDGIDALFVGPSDLSIALSGGAKVDATAREVDEALKHVVARASAANKPVALYAATAERAKQGLAMGARMVTVMSDTGMLRAAAQAALKITRS*