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SCN18_25_8_15_R2_B_scaffold_2010

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2010_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12..203)
DNA (192bp) protein (64aa)
SCN18_25_8_15_R2_B_scaffold_2010_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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675..2696
DNA (2022bp) protein (674aa)
Peptidase M23 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IRV2_METNO
Peptidase M23 {ECO:0000313|EMBL:KFC62942.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptidase M23
SCN18_25_8_15_R2_B_scaffold_2010_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2809..3726
DNA (918bp) protein (306aa)
Putative permease n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTH7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC62941.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
auxin efflux carrier
SCN18_25_8_15_R2_B_scaffold_2010_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3732..4613)
DNA (882bp) protein (294aa)
Glutamyl-or glutaminyl-tRNA synthetase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTH6_9RHIZ
Glutamyl-tRNA synthetase, class Ic {ECO:0000313|EMBL:KFC62940.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glutamyl-tRNA synthetase
SCN18_25_8_15_R2_B_scaffold_2010_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4703..5347
DNA (645bp) protein (215aa)
HhH-GPD family protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UDT4_METS4
HhH-GPD {ECO:0000313|EMBL:KFC62939.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HhH-GPD family protein
SCN18_25_8_15_R2_B_scaffold_2010_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5433..6212)
DNA (780bp) protein (260aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTH4_9RHIZ
HpcH/HpaI aldolase {ECO:0000313|EMBL:KFC62938.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HpcH/HpaI aldolase
SCN18_25_8_15_R2_B_scaffold_2010_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6358..6681)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031452FC
Uncharacterized protein {ECO:0000313|EMBL:KFC62937.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2010_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7029..7793
DNA (765bp) protein (255aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTH3_9RHIZ
SCN18_25_8_15_R2_B_scaffold_2010_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7835..8422
DNA (588bp) protein (196aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC62935.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_25_8_15_R2_B_scaffold_2010_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8507..8749
DNA (243bp) protein (81aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Phosphoribosylformylglycinamidine synthase, purS protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTH1_9RHIZ
purS; phosphoribosylformylglycinamidine synthase subunit PurS
SCN18_25_8_15_R2_B_scaffold_2010_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8753..9448
DNA (696bp) protein (232aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTH0_9RHIZ
SCN18_25_8_15_R2_B_scaffold_2010_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9542..10135)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030584AF
Periplasmic protein thiol {ECO:0000313|EMBL:KFC62932.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dsbE; thiol:disulfide oxidoreductase periplasmic protein
SCN18_25_8_15_R2_B_scaffold_2010_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10132..10317)
DNA (186bp) protein (62aa)
Heme exporter protein CcmD n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J141_POLGS
Heme exporter protein CcmD {ECO:0000313|EMBL:KFC62931.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Heme exporter protein CcmD
SCN18_25_8_15_R2_B_scaffold_2010_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10314..11120)
DNA (807bp) protein (269aa)
Heme exporter protein CcmC n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYW1_9RHIZ
Cytochrome c-type biogenesis protein CcmC {ECO:0000313|EMBL:KFC62930.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
heme exporter protein CcmC
SCN18_25_8_15_R2_B_scaffold_2010_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11185..11424)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMP9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58039.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2010_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11626..11853
DNA (228bp) protein (76aa)
SCN18_25_8_15_R2_B_scaffold_2010_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11859..12527)
DNA (669bp) protein (223aa)
Heme exporter protein B n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYW7_9RHIZ
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
heme exporter protein CcmB
SCN18_25_8_15_R2_B_scaffold_2010_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12524..13054)
DNA (531bp) protein (177aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Heme export protein, cytochrome C-type biogenesis ccmA n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7C7C9_METED
heme exporter protein CcmA
SCN18_25_8_15_R2_B_scaffold_2010_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13367..15814
DNA (2448bp) protein (816aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acnA2; aconitate hydratase AcnA (EC:4.2.1.3)
aconitate hydratase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FC3B00
Displaying 19 items

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