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SCN18_25_8_15_R2_B_scaffold_428

Search features with annotation key words

Displaying items 61-90 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_428_61
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(68042..68449)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W146_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK34061.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_428_62
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(69067..70395)
DNA (1329bp) protein (443aa)
Integrase family protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTC2_LEAB4
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADQ15936.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCN18_25_8_15_R2_B_scaffold_428_63
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(70647..71969)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037C0126
Ethanolamin permease {ECO:0000313|EMBL:KIC95843.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ethanolamine transporter
SCN18_25_8_15_R2_B_scaffold_428_64
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

72171..73874
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7M0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02275.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_428_65
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

74261..75442
DNA (1182bp) protein (394aa)
Acetylornithine transaminase {ECO:0000313|EMBL:AEW01901.1}; EC=2.6.1.11 {ECO:0000313|EMBL:AEW01901.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Acetylornithine transaminase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL60_NIAKG
Acetylornithine transaminase
SCN18_25_8_15_R2_B_scaffold_428_66
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(75553..77454)
DNA (1902bp) protein (634aa)
Peptidase S15 n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3N0_DYAFD
peptidase S15
Peptidase S15 {ECO:0000313|EMBL:ACT94007.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCN18_25_8_15_R2_B_scaffold_428_67
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

77484..77951
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q397X0_BURS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB11241.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
SCN18_25_8_15_R2_B_scaffold_428_68
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(78265..79128)
DNA (864bp) protein (288aa)
SCN18_25_8_15_R2_B_scaffold_428_69
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(79176..79838)
DNA (663bp) protein (221aa)
SCN18_25_8_15_R2_B_scaffold_428_70
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

79939..80937
DNA (999bp) protein (333aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PBM8_CHIPD
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:ACU63092.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_25_8_15_R2_B_scaffold_428_71
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(81009..82562)
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036DDC07
Uncharacterized protein {ECO:0000313|EMBL:EPR71823.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
dockerin-like protein
SCN18_25_8_15_R2_B_scaffold_428_72
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

82886..83461
DNA (576bp) protein (192aa)
RNA polymerase subunit sigma-24 n=1 Tax=Cytophagales str. B6 RepID=UPI0003B49EEB
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO43435.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
ECF subfamily RNA polymerase sigma-24 subunit
SCN18_25_8_15_R2_B_scaffold_428_73
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

83554..84492
DNA (939bp) protein (313aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL15_NIAKG
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEW00854.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_428_74
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

84508..86334
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL16_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO43433.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_428_75
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

86456..86884
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00038002B2
hypothetical protein
Putative periplasmic protein {ECO:0000313|EMBL:EDM36754.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
SCN18_25_8_15_R2_B_scaffold_428_76
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

87001..87099
DNA (99bp) protein (33aa)
SCN18_25_8_15_R2_B_scaffold_428_trna_1
unknown

Not on your lists

comp(87038..87110)
DNA (73bp)
transferRNA Phe
SCN18_25_8_15_R2_B_scaffold_428_77
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(87180..87497)
DNA (318bp) protein (106aa)
adenylate kinase (EC:2.7.4.3)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003771289
Tax=RBG_13_Spirochaetes_68_11_curated
SCN18_25_8_15_R2_B_scaffold_428_78
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(87550..89859)
DNA (2310bp) protein (770aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AEW02631.1}; EC=3.6.1.- {ECO:0000313|EMBL:AEW02631.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
ATP-dependent DNA helicase RecQ n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDZ7_NIAKG
ATP-dependent DNA helicase RecQ
SCN18_25_8_15_R2_B_scaffold_428_79
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

90182..91144
DNA (963bp) protein (321aa)
KpsF/GutQ family protein {ECO:0000313|EMBL:ACU58274.1}; EC=5.3.1.13 {ECO:0000313|EMBL:ACU58274.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381E764
KpsF/GutQ family protein
SCN18_25_8_15_R2_B_scaffold_428_80
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

91169..92251
DNA (1083bp) protein (361aa)
Mannose-1-phosphate guanylyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE00_NIAKG
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KIC90957.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
mannose-1-phosphate guanylyltransferase
SCN18_25_8_15_R2_B_scaffold_428_81
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(92275..93393)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97369.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_428_82
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(93676..94239)
DNA (564bp) protein (188aa)
Intracellular protease, PfpI family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6B5_PEDSD
Glutamine amidotransferase {ECO:0000313|EMBL:KIC92588.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Pfpi family intracellular protease
SCN18_25_8_15_R2_B_scaffold_428_83
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(94409..94987)
DNA (579bp) protein (193aa)
Nucleoside phosphorylase-like protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEW2_FLAJ1
nucleoside phosphorylase-like protein
Nucleoside phosphorylase-like protein {ECO:0000313|EMBL:ABQ06257.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCN18_25_8_15_R2_B_scaffold_428_84
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(95605..98472)
DNA (2868bp) protein (956aa)
dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI000381E988
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:ADB42297.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
dehydrogenase
SCN18_25_8_15_R2_B_scaffold_428_85
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(98986..99654)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0PTT6_ELIME
Uncharacterized protein {ECO:0000313|EMBL:KFC35434.1}; TaxID=238 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica (Chryseobacterium meningosepticum).;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_428_86
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(99676..100635)
DNA (960bp) protein (320aa)
Peptidase, M48 family {ECO:0000313|EMBL:EAY27977.1}; EC=3.4.24.- {ECO:0000313|EMBL:EAY27977.1};; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
Peptidase, M48 family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZNT8_9BACT
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_428_87
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

100767..100946
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP74_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO45025.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_428_88
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(100900..101010)
DNA (111bp) protein (37aa)
SCN18_25_8_15_R2_B_scaffold_428_89
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(101029..102171)
DNA (1143bp) protein (381aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEW03190.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEW03190.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Butyryl-CoA dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP72_NIAKG
butyryl-CoA dehydrogenase
Displaying items 61-90 of 94 in total

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