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SCN18_25_8_15_R2_B_scaffold_929

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_929_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..249)
DNA (249bp) protein (83aa)
Multi antimicrobial extrusion protein MatE n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QSK2_CHLT3
multi antimicrobial extrusion protein MatE
Multi antimicrobial extrusion protein MatE {ECO:0000313|EMBL:ACF14049.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
SCN18_25_8_15_R2_B_scaffold_929_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(290..2413)
DNA (2124bp) protein (708aa)
TonB-dependent receptor n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PTA1_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIM35242.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
SCN18_25_8_15_R2_B_scaffold_929_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2464..3909)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GMH7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAL63731.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_929_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3920..5335)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JMF8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR69403.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_929_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5372..6556)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JMF3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR69398.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
lipoprotein
SCN18_25_8_15_R2_B_scaffold_929_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6562..8706)
DNA (2145bp) protein (715aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003631961
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:ELR69397.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
TonB-dependent receptor
SCN18_25_8_15_R2_B_scaffold_929_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8721..9437)
DNA (717bp) protein (239aa)
ABC transporter ATP-binding protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NL48_ELIME
Contig56, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76737.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
ABC transporter, ATP-binding protein
SCN18_25_8_15_R2_B_scaffold_929_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9437..10330)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JKF0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EZH72705.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
SCN18_25_8_15_R2_B_scaffold_929_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10327..10818)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JKS5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR69395.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_929_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11332..11658)
DNA (327bp) protein (109aa)
SCN18_25_8_15_R2_B_scaffold_929_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12359..12694
DNA (336bp) protein (112aa)
Resolvase domain n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5S7_SPHS2
Resolvase domain
Resolvase domain {ECO:0000313|EMBL:ADZ80092.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCN18_25_8_15_R2_B_scaffold_929_trna_1
unknown

Not on your lists

comp(12633..12705)
DNA (73bp)
transferRNA Lys
SCN18_25_8_15_R2_B_scaffold_929_12
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12704..12841)
DNA (138bp) protein (46aa)
SCN18_25_8_15_R2_B_scaffold_929_13
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12915..13733
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAR4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91723.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_929_14
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13749..13970
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGC1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94092.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_929_15
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14483..15076
DNA (594bp) protein (198aa)
SCN18_25_8_15_R2_B_scaffold_929_16
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15442..16074)
DNA (633bp) protein (211aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTB7_LEAB4
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADQ18655.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCN18_25_8_15_R2_B_scaffold_929_17
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16138..18012)
DNA (1875bp) protein (625aa)
Histidine kinase n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTB8_LEAB4
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ADQ18656.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCN18_25_8_15_R2_B_scaffold_929_18
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18388..19575)
DNA (1188bp) protein (396aa)
Metallophosphoesterase n=1 Tax=Niabella soli DSM 19437 RepID=H1NKH3_9SPHI
purple acid phosphatase
Purple acid phosphatase {ECO:0000313|EMBL:AHF16913.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_8_15_R2_B_scaffold_929_19
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19783..21393)
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQ50_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF16355.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_8_15_R2_B_scaffold_929_20
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21504..22418)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003673CC1
Metallophosphoesterase {ECO:0000313|EMBL:KIA92013.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
cyclic 3',5'-adenosine monophosphate phosphodiesterase
SCN18_25_8_15_R2_B_scaffold_929_21
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22492..24297)
DNA (1806bp) protein (602aa)
RagB/SusD domain-containing protein n=3 Tax=Elizabethkingia RepID=H0KRT1_9FLAO
Glycan metabolism protein {ECO:0000313|EMBL:KFF10105.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
SusD family protein
SCN18_25_8_15_R2_B_scaffold_929_22
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24406..27897)
DNA (3492bp) protein (1164aa)
Collagen-binding protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NG49_ELIME
TonB-dependent Receptor Plug Domain protein
TonB-dependent Receptor Plug Domain protein {ECO:0000313|EMBL:AJW64531.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
SCN18_25_8_15_R2_B_scaffold_929_23
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28057..29175)
DNA (1119bp) protein (373aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH53_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC90746.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
anti-FecI sigma factor FecR
SCN18_25_8_15_R2_B_scaffold_929_24
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29255..29818)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036CD093
Uncharacterized protein {ECO:0000313|EMBL:KIC90796.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ECF subfamily RNA polymerase sigma-24 subunit
SCN18_25_8_15_R2_B_scaffold_929_25
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(29997..31463)
DNA (1467bp) protein (489aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
glycyl-tRNA synthetease n=1 Tax=Segetibacter koreensis RepID=UPI0003661282
glycyl-tRNA synthetease
SCN18_25_8_15_R2_B_scaffold_929_26
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31542..32822)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F3015
Uncharacterized protein {ECO:0000313|EMBL:GAO41480.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_929_27
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32940..34310)
DNA (1371bp) protein (457aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADH-quinone oxidoreductase subunit N n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRW1_NIAKG
NADH dehydrogenase subunit N
SCN18_25_8_15_R2_B_scaffold_929_28
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34495..37764)
DNA (3270bp) protein (1090aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D3EC4
NADH--quinone oxidoreductase subunit L {ECO:0000313|EMBL:GAO41483.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
NADH dehydrogenase subunit L
SCN18_25_8_15_R2_B_scaffold_929_29
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37810..38145)
DNA (336bp) protein (112aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADH-quinone oxidoreductase subunit K n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRV8_NIAKG
NADH dehydrogenase subunit K
Displaying items 1-30 of 43 in total

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