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SCN18_25_8_15_R2_B_scaffold_1512

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1512_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..339
DNA (339bp) protein (113aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Niabella soli DSM 19437 RepID=H1NV00_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC90990.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1512_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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429..983
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC90991.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCN18_25_8_15_R2_B_scaffold_1512_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1079..1756
DNA (678bp) protein (226aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCJ7_NIAKG
monofunctional biosynthetic peptidoglycan transglycosylase
SCN18_25_8_15_R2_B_scaffold_1512_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1742..2791)
DNA (1050bp) protein (350aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815, ECO:0000256|SAAS:SAAS00048658};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-ACP synthase n=1 Tax=Pedobacter agri RepID=UPI00029A6576
SCN18_25_8_15_R2_B_scaffold_1512_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2816..3472)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THF1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02797.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_1512_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3489..4058)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THF2_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC96341.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1512_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4141..4731)
DNA (591bp) protein (197aa)
Acyl carrier protein phosphodiesterase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THF3_NIAKG
ACP phosphodiesterase {ECO:0000313|EMBL:KIC96342.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Acyl carrier protein phosphodiesterase
SCN18_25_8_15_R2_B_scaffold_1512_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4734..5390)
DNA (657bp) protein (219aa)
Peptidase M10A and M12B matrixin and adamalysin n=1 Tax=Niabella soli DSM 19437 RepID=H1NRN1_9SPHI
peptidase M10
Peptidase M10 {ECO:0000313|EMBL:AHF15498.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_8_15_R2_B_scaffold_1512_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5685..6572
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGA0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02739.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_1512_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7567..8604)
DNA (1038bp) protein (346aa)
2-oxoacid ferredoxin oxidoreductase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI00037F63CD
2-oxoacid:ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:KIC96492.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
2-oxoglutarate synthase
SCN18_25_8_15_R2_B_scaffold_1512_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8811..9125)
DNA (315bp) protein (105aa)
Membrane protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W195_9FLAO
Membrane protein {ECO:0000313|EMBL:KFF10690.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
protein of unknown function DUF125 transmembrane
SCN18_25_8_15_R2_B_scaffold_1512_12
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9292..9777)
DNA (486bp) protein (162aa)
GCN5-related N-acetyltransferase id=4011129 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
N-acetyltransferase GCN5
Tax=GWA2_Bacteroidetes_32_17_curated
SCN18_25_8_15_R2_B_scaffold_1512_13
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9977..10720
DNA (744bp) protein (248aa)
ATPase involved in chromosome partitioning n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KX64_SOLCM
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:KIC91075.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
chromosome partitioning ATPase
SCN18_25_8_15_R2_B_scaffold_1512_14
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10882..11562
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360CCD9
Esterase {ECO:0000313|EMBL:KIC92723.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
esterase
SCN18_25_8_15_R2_B_scaffold_1512_15
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11606..12502)
DNA (897bp) protein (299aa)
Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZN4_DYAFD
Uncharacterized protein {ECO:0000313|EMBL:ETZ23767.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
AraC family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1512_16
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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12671..13684
DNA (1014bp) protein (338aa)
dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI000299F565
d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCN18_25_8_15_R2_B_scaffold_1512_17
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13691..15157
DNA (1467bp) protein (489aa)
Aldehyde dehydrogenase A, NAD-linked n=1 Tax=unidentified eubacterium SCB49 RepID=A6EN91_9BACT
Aldehyde dehydrogenase A, NAD-linked {ECO:0000313|EMBL:EDM45107.1}; TaxID=50743 species="Bacteria; Bacteroidetes; environmental samples.;" source="unidentified eubacterium SCB49.;"
aldehyde dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1512_18
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15356..16918
DNA (1563bp) protein (521aa)
Alpha-L-rhamnosidase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAU7_9BACT
alpha-L-rhamnosidase family protein
Tax=RBG_16_Planctomycetes_64_10_curated
SCN18_25_8_15_R2_B_scaffold_1512_19
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17007..17786
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003645ED5
Uncharacterized protein {ECO:0000313|EMBL:EJS65750.1}; TaxID=1053179 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG2X1-1.;"
Short-chain dehydrogenase/reductase SDR
SCN18_25_8_15_R2_B_scaffold_1512_20
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17783..18634
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035DB57E
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ADB50360.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCN18_25_8_15_R2_B_scaffold_1512_21
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18642..19394
DNA (753bp) protein (251aa)
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Schlesneria paludicola RepID=UPI00029A683C
Aldolase {ECO:0000313|EMBL:KDE56937.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
SCN18_25_8_15_R2_B_scaffold_1512_22
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19402..20217
DNA (816bp) protein (272aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Schlesneria paludicola RepID=UPI00029A683C
SCN18_25_8_15_R2_B_scaffold_1512_23
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20523..20999
DNA (477bp) protein (159aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides merdae RepID=A7ADZ9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:ETZ21577.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
TonB-dependent receptor plug
Displaying 23 items

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