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SCN18_25_8_15_R2_B_scaffold_1545

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1545_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..718)
DNA (717bp) protein (239aa)
SCN18_25_8_15_R2_B_scaffold_1545_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(678..2159)
DNA (1482bp) protein (494aa)
Virulence factor MVIN superfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JRF5_9BACT
membrane protein
Tax=GWB2_Planctomycetes_41_19_curated
SCN18_25_8_15_R2_B_scaffold_1545_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2161..3291)
DNA (1131bp) protein (377aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000313|EMBL:EMR04266.1}; EC=2.6.1.87 {ECO:0000313|EMBL:EMR04266.1};; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NAS5_9BACT
TDP-4-keto-6-deoxy-D-glucose transaminase
SCN18_25_8_15_R2_B_scaffold_1545_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3288..3998)
DNA (711bp) protein (237aa)
Acetyltransferase family protein {ECO:0000313|EMBL:EXZ19632.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
Acetyltransferase id=4524237 bin=GWF2_Bacteroidetes_38_335 species=Rickettsiella grylli genus=Rickettsiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
acetyltransferase
SCN18_25_8_15_R2_B_scaffold_1545_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4068..6365)
DNA (2298bp) protein (766aa)
Capsular exopolysaccharide family {ECO:0000313|EMBL:AEW02970.1}; EC=2.7.10.2 {ECO:0000313|EMBL:AEW02970.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Capsular exopolysaccharide family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK32_NIAKG
capsular exopolysaccharide family protein
SCN18_25_8_15_R2_B_scaffold_1545_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6432..7271)
DNA (840bp) protein (280aa)
Soluble ligand binding domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK31_NIAKG
Soluble ligand binding domain-containing protein
Soluble ligand binding domain protein {ECO:0000313|EMBL:AEW02969.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_1545_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7332..7886)
DNA (555bp) protein (185aa)
NusG antitermination factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK30_NIAKG
NusG antitermination factor
NusG antitermination factor {ECO:0000313|EMBL:AEW02968.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_1545_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8317..9339)
DNA (1023bp) protein (341aa)
Oxidoreductase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK34_NIAKG
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEW02972.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_1545_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9336..9986)
DNA (651bp) protein (217aa)
transferase hexapeptide repeat containing protein id=3847283 bin=GWF2_Bacteroidetes_33_38 species=Mesoflavibacter zeaxanthinifaciens genus=Mesoflavibacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
transferase hexapeptide repeat containing protein
Tax=GWF2_Bacteroidetes_33_38_curated
SCN18_25_8_15_R2_B_scaffold_1545_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10172..10300
DNA (129bp) protein (43aa)
SCN18_25_8_15_R2_B_scaffold_1545_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10316..11761
DNA (1446bp) protein (482aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG90_NIAKG
6-phosphogluconate dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1545_12
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11764..13275
DNA (1512bp) protein (504aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG89_NIAKG
glucose-6-phosphate 1-dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1545_13
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13399..14130
DNA (732bp) protein (244aa)
6-phosphogluconolactonase {ECO:0000313|EMBL:AEW02727.1}; EC=3.1.1.31 {ECO:0000313|EMBL:AEW02727.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
6-phosphogluconolactonase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG88_NIAKG
6-phosphogluconolactonase
SCN18_25_8_15_R2_B_scaffold_1545_14
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14205..14297)
DNA (93bp) protein (31aa)
SCN18_25_8_15_R2_B_scaffold_1545_15
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14386..15705
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036E0F8B
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
ammonium transporter
SCN18_25_8_15_R2_B_scaffold_1545_16
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15912..16550
DNA (639bp) protein (213aa)
Transcriptional regulator, TetR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV5_NIAKG
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEW02040.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_1545_17
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16547..17905
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381971F
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AEW02039.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_1545_18
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17927..19108
DNA (1182bp) protein (394aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV3_NIAKG
RND transporter {ECO:0000313|EMBL:KIC89731.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
RND family efflux transporter MFP subunit
SCN18_25_8_15_R2_B_scaffold_1545_19
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19165..22764
DNA (3600bp) protein (1200aa)
Acriflavin resistance protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV2_NIAKG
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:AEW02037.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_1545_20
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22864..23115)
DNA (252bp) protein (84aa)
Plasmid stabilization system n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XVF7_PEDHD
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:ACU04023.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCN18_25_8_15_R2_B_scaffold_1545_21
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23128..23367)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THM3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97451.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_1545_22
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23457..24545)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZSQ1_9BACT
Prabable sialidase
Tax=RBG_13_Planctomycetes_62_9_curated
SCN18_25_8_15_R2_B_scaffold_1545_23
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24761..25174)
DNA (414bp) protein (138aa)
Stress responsive alpha-beta barrel domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG84_NIAKG
stress responsive alpha-beta barrel domain-containing protein
Stress responsive alpha-beta barrel domain-containing protein {ECO:0000313|EMBL:AEW02723.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_1545_24
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25190..26290)
DNA (1101bp) protein (367aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AHJ99639.1}; EC=3.5.1.28 {ECO:0000313|EMBL:AHJ99639.1};; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036EC15A
SCN18_25_8_15_R2_B_scaffold_1545_25
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26909..27508)
DNA (600bp) protein (200aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN5_NIAKG
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEW02888.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_1545_26
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27683..27928)
DNA (246bp) protein (82aa)
Regulatory protein MerR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK1_NIAKG
regulatory protein MerR
Regulatory protein MerR {ECO:0000313|EMBL:AEW01989.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 26 items

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