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SCN18_25_8_15_R2_B_scaffold_1616

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1616_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..910)
DNA (909bp) protein (303aa)
Peptidase M56 BlaR1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NNC9_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17535.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_8_15_R2_B_scaffold_1616_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1002..1364)
DNA (363bp) protein (121aa)
transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI00035E5E72
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHF15308.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_8_15_R2_B_scaffold_1616_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1539..1868
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO42467.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
SCN18_25_8_15_R2_B_scaffold_1616_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2206..2751
DNA (546bp) protein (182aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIL0_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW02863.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_1616_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2751..4367
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIL1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02864.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_1616_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4700..5674
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036875D3
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEE48924.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCN18_25_8_15_R2_B_scaffold_1616_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5624..5809)
DNA (186bp) protein (62aa)
SCN18_25_8_15_R2_B_scaffold_1616_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6175..6567
DNA (393bp) protein (131aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AI69_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11385.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
SCN18_25_8_15_R2_B_scaffold_1616_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6585..7928)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F13D9
Uncharacterized protein {ECO:0000313|EMBL:EOS00965.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1616_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7941..9323)
DNA (1383bp) protein (461aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL28296.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
D-xylose transporter XylE id=3740192 bin=GWF2_Melainabacteria_37_15 species=uncultured bacterium CSLF43 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
sugar transporter
SCN18_25_8_15_R2_B_scaffold_1616_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9395..11455)
DNA (2061bp) protein (687aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037E45F4
Uncharacterized protein {ECO:0000313|EMBL:KKB54346.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
glycosyl hydrolase family protein
SCN18_25_8_15_R2_B_scaffold_1616_12
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11533..13812)
DNA (2280bp) protein (760aa)
glycosidase (EC:3.2.1.-)
glycosyl hydrolase family 32 n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4AB21
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_25_8_15_R2_B_scaffold_1616_13
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13806..15539)
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037C03E5
Uncharacterized protein {ECO:0000313|EMBL:KKB56602.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
tetratricopeptide repeat-containing SusD/RagB family protein
SCN18_25_8_15_R2_B_scaffold_1616_14
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15552..18752)
DNA (3201bp) protein (1067aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037E41E7
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KKB56601.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1616_15
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19102..19602
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037AB11E
Uncharacterized protein {ECO:0000313|EMBL:KKB54347.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
GntR family transcriptional regulator
Displaying 15 items

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