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SCN18_25_8_15_R2_B_scaffold_2087

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2087_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..1598
DNA (1596bp) protein (532aa)
Phytoene dehydrogenase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JP71_9BACT
Phytoene dehydrogenase {ECO:0000313|EMBL:ELR70640.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
phytoene desaturase
SCN18_25_8_15_R2_B_scaffold_2087_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1602..2438
DNA (837bp) protein (279aa)
Squalene/phytoene synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAT1_CHIPD
squalene/phytoene synthase
Squalene/phytoene synthase {ECO:0000313|EMBL:ACU63045.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_25_8_15_R2_B_scaffold_2087_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2453..2914
DNA (462bp) protein (154aa)
Fatty acid hydroxylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAT0_CHIPD
fatty acid hydroxylase
Fatty acid hydroxylase {ECO:0000313|EMBL:ACU63044.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_25_8_15_R2_B_scaffold_2087_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2919..3296)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036704F6
stress responsive alpha-beta barrel domain-containing protein
Tax=RBG_16_Spirochaete_67_19_curated
SCN18_25_8_15_R2_B_scaffold_2087_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3250..3570)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C857_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL66209.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2087_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3600..4880)
DNA (1281bp) protein (427aa)
L-sorbosone dehydrogenase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JX95_9BACT
L-sorbosone dehydrogenase {ECO:0000313|EMBL:ELR73410.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
glucose/sorbosone dehydrogenase
SCN18_25_8_15_R2_B_scaffold_2087_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5023..6162)
DNA (1140bp) protein (380aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQP9_NIAKG
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEV96783.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_2087_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6168..10526)
DNA (4359bp) protein (1453aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQP8_NIAKG
Acriflavine resistance protein B {ECO:0000313|EMBL:KIC91412.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
CzcA family heavy metal efflux pump
SCN18_25_8_15_R2_B_scaffold_2087_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11303..12826)
DNA (1524bp) protein (508aa)
type I phosphodiesterase (EC:3.-.-.-)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBE5_9SPHI
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EHQ31199.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCN18_25_8_15_R2_B_scaffold_2087_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12847..13347)
DNA (501bp) protein (167aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJC7_NIAKG
Glyoxalase {ECO:0000313|EMBL:KJS07180.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
SCN18_25_8_15_R2_B_scaffold_2087_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13464..13643)
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KHJ39528.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
SCN18_25_8_15_R2_B_scaffold_2087_12
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13824..14258
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBU5_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD58498.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCN18_25_8_15_R2_B_scaffold_2087_13
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14276..14683)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000380027E
Ubiquinone/menaquinone biosynthesis protein {ECO:0000313|EMBL:KIF17776.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2087_14
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15030..15173)
DNA (144bp) protein (48aa)
Uracil phosphoribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ24_NIAKG
PyrR protein {ECO:0000313|EMBL:KIC90142.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
uracil phosphoribosyltransferase
Displaying 14 items

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