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SCN18_25_8_15_R2_B_scaffold_2354

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2354_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(499..2193)
DNA (1695bp) protein (565aa)
SSS sodium solute transporter superfamily n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KX40_HALH1
sodium solute transporter superfamily protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_25_8_15_R2_B_scaffold_2354_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2232..3734)
DNA (1503bp) protein (501aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
arabinose isomerase n=1 Tax=Segetibacter koreensis RepID=UPI000382F0DB
L-arabinose isomerase
SCN18_25_8_15_R2_B_scaffold_2354_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3770..4465)
DNA (696bp) protein (232aa)
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:ADZ77600.1}; EC=5.1.3.4 {ECO:0000313|EMBL:ADZ77600.1};; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CCR4_SPHS2
L-ribulose-5-phosphate 4-epimerase
SCN18_25_8_15_R2_B_scaffold_2354_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4545..6182)
DNA (1638bp) protein (546aa)
Ribulokinase {ECO:0000256|RuleBase:RU003455, ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|RuleBase:RU003455, ECO:0000256|SAAS:SAAS00183333};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Ribulokinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPU0_NIAKG
L-ribulokinase
SCN18_25_8_15_R2_B_scaffold_2354_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6239..6949)
DNA (711bp) protein (237aa)
NUDIX hydrolase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2N3_9SPHI
NUDIX hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_25_8_15_R2_B_scaffold_2354_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7158..9359)
DNA (2202bp) protein (734aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8F1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99121.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_2354_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9602..11230)
DNA (1629bp) protein (543aa)
Sodium/nucleoside co-transporter permease NupC n=1 Tax=Flavobacteria bacterium (strain BBFL7) RepID=Q26I40_FLABB
Nucleoside permease NupX {ECO:0000313|EMBL:KHJ36916.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
nupC; sodium/nucleoside co-transporter permease
SCN18_25_8_15_R2_B_scaffold_2354_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11396..12685)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Formosa sp. AK20 RepID=M7MEA7_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01361.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_2354_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12744..13418)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036E269B
Uncharacterized protein {ECO:0000313|EMBL:KIF28666.1}; Flags: Fragment;; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
Displaying 9 items

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